| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43429 |
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| Symbol | |
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| ID | 7197437 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 437214 |
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| End bp | 438799 |
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| Gene Length | 1586 bp |
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| Protein Length | 442 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | chorismate synthase |
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| Protein accession | XP_002177933 |
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| Protein GI | 219112363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0435185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGTGATCTC TTCCGAGGTC ATCCATCTGC CTAAATTGAG CAAACGTTCG CTTCTCCGAT
CATTACATTC GTGACTACAC TTGCCTACAC ATGAGGATAC TAGCCTCCGT CTGGGGCGTC
GTTACGCTCT TCCCTTCGGC GCTCGCCTTT TCTCTGACCA TGGGTACAGG AAATTCCTTC
GGTCGCGTCT TCCGGATCAG CACGTGGGGT GAATCGCACG GCGGCGGCGT CGGTGTCGTC
TTGGACGGTT GTCCTCCCCG CATTCCTGTC TCGCGCGAAG AAATTCAAAT GGATCTGGAC
CGCCGTCGTC CGGGACAATC CCGCATCACC ACTCCCCGGA ACGAAGCCGA CGCAGTGGAG
ATCATCTCGG GTCTTTCCCC GGATGGTTTG ACACTCGGTA CGCCTATTGC CATGCTGGTG
CGGAACAAGG ATCAGCGCTC GCAGGATTAT TTGGACAACG ACATGAAGGT TGCCTACCGT
CCATCGCACG CGGACGCCAC GTACGACGCC AAGTACGGAG TCCGGGCCGT GGCCGGTGGG
GGACGCTCCA GTGCACGTGA AACAATTGGA CGGGTGGCGG CGGGAGCGAT TGCTCGTAAG
CTCTTGCACA AGTACAACGG CATTGAGATT CTCGCGTACG TTTCCAAAGT GCAGGACATT
GGCTGTTCCG TGGACGACGA TACCTTCACG ATGGAGGACG TGGACGCCAA CATGGTGCGG
TGCCCGGATC AGGCAGCAGC GGAAACCATG TTGGCACGGA TTGACGATAT ACGCAAGTCA
GGGAACTCGA TTGGTGGGGT GGTGACCTGC GTGGCGCGCA ATGTCCCGGC TGGACTCGGT
GCTCCCGTCT TTGACAAATT GGAAGCGGAC TTGGCCAAGG CTTGCTTGTC CATTCCCGCG
GCCAAGGGTT TTGAGAGTGG AGACGGCTTT GCCGGAACAC TCTTGACTGG TAAGGATCAC
AACGACGAGT TCTACGTGGA TCCCGAGACC GGGGCGACCC GCACCAAGAC GAACCGATCC
GGTGGCATCC AAGGTGGAAT CAGCAACGGA GAAAACATTG TCATTCACGT TGCCTTTAAA
CCAACCTCCA CTATTGGACA AGCACAGGTA AGACTTTGAG AGATTCAATC AACATGTCGG
AGTGGACTGC CCCGAGGTTG ATTTCGCTGA CGCTCCAATC ACTTAATTGT TCTTTCGCCC
TTTGTTGCAG AGCACGGTGA CGCGTGATGG ACAAGAAGTT GAATTACGCG GCAAGGGCCG
ACACGATCCA TGCGTCCTTC CTCGAGCCGT ACCCATGGTT GAAGCCATGG TCGCGCTGAC
CTTGGTGGAT CACCTTATGA TGCAGCAGGC TCAGTGTGAA CTCTTTCCGA ACGAGGCGGC
GGCAGAAGAC TTGCCCAATC CGATGGGTAA GACCGCACGA CGACAAGGTG GACCCGTGCA
CCAGGAGCCT GTTGCTAGCG GTCCGGTAAG TCAAAGAGTA GACGAAGAGT AACTCATAAA
CACCGCAAAC GCAATTCGTC TTTTTCTAGA CGTGGGCACT AAATAATGGT ACCCTATTGC
GACATTCGTT GTTCGCTGTG TACTGA
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| Protein sequence | MRILASVWGV VTLFPSALAF SLTMGTGNSF GRVFRISTWG ESHGGGVGVV LDGCPPRIPV
SREEIQMDLD RRRPGQSRIT TPRNEADAVE IISGLSPDGL TLGTPIAMLV RNKDQRSQDY
LDNDMKVAYR PSHADATYDA KYGVRAVAGG GRSSARETIG RVAAGAIARK LLHKYNGIEI
LAYVSKVQDI GCSVDDDTFT MEDVDANMVR CPDQAAAETM LARIDDIRKS GNSIGGVVTC
VARNVPAGLG APVFDKLEAD LAKACLSIPA AKGFESGDGF AGTLLTGKDH NDEFYVDPET
GATRTKTNRS GGIQGGISNG ENIVIHVAFK PTSTIGQAQS TVTRDGQEVE LRGKGRHDPC
VLPRAVPMVE AMVALTLVDH LMMQQAQCEL FPNEAAAEDL PNPMGKTARR QGGPVHQEPV
ASGPTWALNN GTLLRHSLFA VY
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