Gene PHATRDRAFT_43416 details

Gene Information

• Locus tag: PHATRDRAFT_43416
• ID: 7197142
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 402771
• End bp: 406866
• Gene Length: 4096 bp
• Protein Length: 577 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002177925
• Protein GI: 219112347

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.452932
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AATCATAGAA CACATCAAGA ATTTGGTTTA AATCACATTT GCTTCAAAGT CAGTGAACCC 
AAGCGTCTCC AATAGCCTCT GCTACAGTTA TCTTTAACAA AGTACGAAGC AGACGTCCAC 
ACGCTGCTGC TTTGCTAAAG CGAACGTTTG CCGTCGGCAT GTCCTCAGCA GTCGACTTAC 
CGGAGGTCGC CTGGGAGCAT ATCTCTACTT TTTTATCCGC GCCCGACGTG TTGAGTTTAC 
TGAGCACGCA TCGTTCCTTA TACAGTATCG GTCTCAATCC ATCCTTCTGG GATTTGCTAA 
CCCGACGTGA AGGCGCCGAG CGCCAGCTTC TGTCGGAAAC TCCCGGTGAT AAAAGTCGAT 
CGCCCCCGGC TGCACGTGCC AAACGCCGGT TTCTTCGAGC CGCCTACTGC CAATCTTTAC 
CATCTGTCCA CTGGAGTGCG GTCCGTTCTC ATCCAAAAGA CCCAACTGCA CCGAGCGCTC 
GTGAAGGACA CGTCAGTTGT GTCATGGGCG ATAAAGTTGT GGTGACGGGC GGATTTACCG 
AGGACGCTGC CATCTACGTT CGAGATCTGC AACATTTCAA GAACGGCGAA TGGGAGCGTA 
TTGTACCCGA GGGGCATCCA GGATTTTCCT ACGGTTCATC TTTGACTGCT CTGGAAGAGC 
ATCGAGCTGT ATTATTTGGT GGCTTCCTAA GCGGCGGATA TGCCAACGAG ACCGATCGCG 
TTGCGATTCT GACGTTGCTA AGGAACGCTG AGGACGGAAT CTTGAACGGA TCTTGGGAGA 
TCAAAACGGT GCTGCCTTCT TGCGCGACAT TATTCCCAGA ACAAATTCAA AACTGGCAAC 
TGAGTTGTGC GCGGGCCTAT CATTCTGCAA CTTTGCTATC AAATCGGTAT TTGTTCATAA 
GCGGCGGCAT GCAAACACGA GGTTCTATTT TGAATCCTTT ACTTTTGGAC ACGTTAACAT 
GGACCTGGAT TGACAGTCAT TCTATTACAA CGGGGATTTC GCCGTCTCCC CGGTTCGGTC 
ATTCGGTTAT CCTCGATGAA GCCCGTTCAC GGCTAGTCCT ATTCGGTGGT GGAAATGGAT 
CCGATTTATT GCGTTCCGGT CGAGACAATT CAGAAGTGTG GGAGTTGCGT ATGAGCACCT 
TCTGGCGGAG AGGCTTAATC GAATCGCTAC CCTGGGATTG GCGTTTGCTG CATAGAAACC 
ATAACGAAAA ATCTGAGGAT GAAGATGACG GTGCAGAAAA TAGAGATGCT GGTATCAATA 
TGGCGGCTAT GAATGAAGAT ATTGCCAATA CTCTCCGGCC ATCAGAAATC CTAGTGTTGG 
GACGTTGTCA CATCTCCCAC AGAATATCTC GCGACACGGT TTTACTTGCG TTTGGATCTG 
GCCGTCCGTC GACTAACGGT ATATTGGCCT TTGATTTGAT GACGAATACG TTCTTTCGTC 
CCGCTGTTTC CGGAAGCTTG CCACAACGAC GTTTTACATT GACATCGATG TTTCTACCAG 
CTCAGGCCTG TATTGTTGTG CATGGGGGCT TTGGCCCGAG ACATGCCAGC TCTTCAGTCG 
ACATGCGTAC GTTTCGTAAT TGCAGTAATG CATCTTTTCT GGTCCGCCTT ATCTCTCACT 
CCAGTTTTGT TTTCGATTGC CACTTTACTT TTAGGTATAC TGGATTTGGC GCCTGCATTG 
AAAAACAAGA ATTTTGGATT CACTTTGGAC CCACACGGGC GATCATACCT TCCTGTTCAG 
GATGCCGACA TGATGGTGGA GCGGAGTTCC CAGGCAAGCT CTATCAGTGG TCTGCTTACG 
ATGCTGAATG GGCTGGAGCC AGGCGCCCGT CGTTTAGCGG CAGGACAGCT GTTGAGTCAA 
ATGCAAGACA ATGGACGTAG CAATGGACGC GGAGCCGCTT TACTCAGTAT GATTGTCGAG 
GGAACCGCTA GATTTGCGAT GGACGAGGAG GAAGACAATA GTGCAGAGGA CGCTACTTGA 
TTGCCTGCGA TAGAAGTATC GGTATTATAC AAAATGTATG GATGCAAGAG GGTAATGCAT 
TCATATGTCG AACAAATCAT ATAAATTTCA ATTTATGTAT CTTACCCCGA AGGAGGTTTA 
TAGCCACCGG AAGCGGGAGC TACTGTAGTT GAATGAATAT TTGTGTACTC ACTCATGAAG 
AAACGACGGC TGGCCAAGTC ATGGGGTTGG CGTCGAGGCG GATCGGTTCC ACTCACAAAA 
CCCACCAAGT AAAGGGAATT GAATACCCAG ATGCTACCAG CACGCCCGGA CGACCCACTA 
TCGTCCCAAA CCTTGTTAAC GTACGTACTC TCTTTACACC ATGATTTGGG AACGCAACGC 
ATCGCTTTGA CGTCTGGTTG TTTGTCTTCT TTGGAACCGA TGAAACCCAG CGCTACAAAA 
TCGTCCCCAG GTGGAACAGG TTCCCAAGCA TAGAAATGGT TGCTTCCGTG CGTTAGGCTC 
CAGGCTAAAC GATATCGAGC AGGATAGGGC ATGTACTTGT CTAAGACGTG GGGAAGCCAG 
CTACTACCTC CTACCCAACT ACCAGACGTG TCGGTGACTT CCAAAAACAG GCGCTCATTG 
CTGTCTCGAT TTGGATTATC ATAACCATGG CCAGCAAAGT GTCCAAGCGA AATCGAGACC 
TTATTTTGTT TCAAACTGCT GCTGGCGTGC GGTTCCCAGA CGCTAGTTTT ATAGCGACTC 
ATGCTTCCTT GGCTGTTCCA GACCAGGTTG AATTTTGATG CTTTCTTAAC CTTCACTTTT 
ATTGAGCCCA AAACGGCCGG GGGGATCTTG ACATCTCGTT TGCTGTCGTC ATCAGATGGC 
ATAGGAGGTA AAGGCAAACC ACCATTAAAA GTTGCCAGTG AACTTTGTAG ATTGCCGTCA 
TCTTCAAACC CAACCGCTCC CTTGAACTCG TCGAGGCTGA TGAACCCATC TTGATCGTGA 
TCGAGCTCTT TCATAAATCC AGAAAGGAGA GCGGAGTCTA GCTTCAAACC CAACCATTCC 
ATACCACGAC GAAGATCTTC GCCGCTAAGC AATCCATCGC GGTCACGGTC AATGGCGCCG 
AAGGCATCTC TAGGAAACAT TCCTCTCGAT TTCAGCAATG CGGTGATACG CCCAGCAGCA 
ATCTTATAAT TGAGAAGATG GTGCTCGTCA GCAGTGATGA AAACTTTGGA AAGTGCTGTG 
GTCGCCGGAT CGATATGCTT CCGGCGGCGA TTGCTCCGAA GCTCCACAAA GTAGTTGTAT 
CGCCTTTCCA AATCATTGTT TTGCAATGCT CGAAGGAGAA GCGTAACTTC GCGTGGTTGA 
TAGTTGACCT GACTGTCGAT AAAGCGGAAA CAAGAGTAGG CTGTAGAGTG CTGGAAACTT 
TGTGCTGGTT CGTACCCGTA CGTTGAGTCA AGGAGAGTTC GTTCTGTTCG AAGCGCAACG 
GTTGTATCCC TACCAGGAAT AAGTGGCAAA GCCGACTGTT GGTGTAATAC TGCACGCATG 
CACTCCGCCT CGAACAGAGA CATGATCACG TAATAGCGAC CAGCCTGGAC TCTGTAGAAC 
ATTCGTTGTG TAAGATAATG TTTTAGCTCG TCAAACGTAA TAACACGGTT CTGAACATCT 
GGCATTTGCT CAAAGAACCG GTCCCCATCT TCACCGTCGA CATCAACATC AACCGCTCGC 
AGCACCTCCT TCAACTCCGT AACCGAAATC GTTCCAGAAC TGTCACCATC GGCTCCAAGA 
AACGCACGCT TCAAAGTCTT CTCTTGATCT ACTGTAAAAG GCTTTCCCAC AGCTGCAACT 
TCCTGTAGCG CAGCCTTTGA TGGAGTAAAG TCCATAGTAA CAATGACATT CTTCAGTCGT 
CGATGGGTCT TTGAAGCCCA TTGCTTCTCG TAGTAGTTGC GGGATACCAA TAGATAGTCA 
GGAAATTCTA GGCCAATTGC TTTTGAAAAA AGGTAATTCT TCACAGTGAA CTGCGAAGCA 
GGATAAAATG CCTTTTGCCA AGACTGGATC TTCTCTTCGC CGTCTGCTGT TGCTTCCGTT 
CGATTTTTTT TGTAGTTTGG ATCCACACCT TTCAATGTTA CTGAAAGCGA CTGGACAGGC 
CAAGCCACAG GACTCT 

 

Protein sequence

MSSAVDLPEV AWEHISTFLS APDVLSLLST HRSLYSIGLN PSFWDLLTRR EGAERQLLSE 
TPGDKSRSPP AARAKRRFLR AAYCQSLPSV HWSAVRSHPK DPTAPSAREG HVSCVMGDKV 
VVTGGFTEDA AIYVRDLQHF KNGEWERIVP EGHPGFSYGS SLTALEEHRA VLFGGFLSGG 
YANETDRVAI LTLLRNAEDG ILNGSWEIKT VLPSCATLFP EQIQNWQLSC ARAYHSATLL 
SNRYLFISGG MQTRGSILNP LLLDTLTWTW IDSHSITTGI SPSPRFGHSV ILDEARSRLV 
LFGGGNGSDL LRSGRDNSEV WELRMSTFWR RGLIESLPWD WRLLHRNHNE KSEDEDDGAE 
NRDAGINMAA MNEDIANTLR PSEILVLGRC HISHRISRDT VLLAFGSGRP STNGILAFDL 
MTNTFFRPAV SGSLPQRRFT LTSMFLPAQA CIVVHGGFGP RHASSSVDMR ILDLAPALKN 
KNFGFTLDPH GRSYLPVQDA DMMVERSSQA SSISGLLTML NGLEPGARRL AAGQLLSQMQ 
DNGRSNGRGA ALLSMIVEGT ARFAMDEEED NSAEDAT