Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43412 |
Symbol | |
ID | 7197141 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 377538 |
End bp | 379169 |
Gene Length | 1632 bp |
Protein Length | 454 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177608 |
Protein GI | 219111713 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCT GTTCTGTTCT CTTCATTGCT CTCGTCGCTG TCGCTTCTGC TACAGAAACC CAGCCCGGTA CGTCATGTGA GGACCCCGGA TGCTTCGACT TGGAATCAAA GGCTTCCGTA AGGTTTGTTG AAGTACTGCC TCCTTTCATT AGTCTCACCC TTTTTCAATA TCTGCATTGG CTGTCATTAC AGAACGCCAC TTGGCTGCTG TCTGCAAACC CAAGAATCTG GACTTTTCTC AGTTCTCCAA CGGGGAATTC ATCGATAATG TCAACGAAAT TCCTGGGTTC GGCGTCAAGA TCGACGTAAA AACAGGATCG CCGGGAAAAT GCCAATCTCC GAAGGCTCAG ATTATCGACA CGGAAGGTGA TCTTGCTGAC GGGTGTGGCT CTGATCCCGT TGACTCGGAT CTATCATCGA ACTTTCTTGG CAAAGCGGTC ATTATTGGAT CCAAGGGAAC GACATGCGTC GCTAACGATT GCCGTTTCGG AGGGACCGTT ACTTTCACAT TCTCCAAGAA AATCAACCTC AAGTACTTCG ACCTTCTGGA TATTGATGAA GACATTAGCG CCACTCTTAC TTTCTTCGAT GATAGCGTCG TCGAACTTGG AAGTGCGCCC ATCATTGGTG ACAATGGTTT CTACCGCTGG AGTGTAAACA GTGTCAATGT GAAGAAGCTT GCTGTCAAGT TTAAGCGGTC TGGAGCCATC CCCAATGTTG TTTGGCGTGA ATGTCCCGGA GAACCTGGTA CATTCGGGGA TCCTCATTTT AAGACTTGGG CTGGTCACAA GTTTGACTAT CACGGACAGT GCGATCTCGT CCTCACGAGT GCTCCAAACG CTGCCGAGGG TAAGGGACTC GACGTCCATG TTCGCGCCAC CCACAAGAAG TTTTTCTCCT ACATTAGCGC TACTGCAATC AGAATTGGCA ACGAAGTTTT CGAAGTCGCC AATCACGGAA AGGTGTACCT TAACGGGAAT GAAAACATCG ATTTCGAGAA GGACGTGACC ATATCGGGTT ACCCCATCAA GTTCAATGAC ACCCCCGCTC CAAATGGTCG CCTTCAGACT ATGTATAACG TCCATCTAAG CGAACACGAA CGCATCGAAA TCAAGGTCTT CAACGTCTTT ATTTCCGTCA AGATCCGCTC CCCTAGTGCT GAGCATTTCA TGGGCTCTAG CGGCATAATG GGCGATTTCT ACACAGGACT CATGTTCTCG CGTGACGGCC AAATATTAAC CAATCCTGAC GAGTTTGGTG CTGAATGGCA GGTCAACGCT GACGATGGAA ATATCTTCCG TACTGTCCAA GAACCTCAGT TCCCAGCAAA ATGCCTGGCA CCGGAGCCTA TGGACCAATC GCGCATGCTA CGGCATGGTA TTACTTATCA ACAGGCCGAA GAAGCCTGCA ACTTCTGGAA TGAGGACAAG GAGGCGTGTA TTTACGACAT CTTAGCTACG GGAGATCTGG AAATGGCGGG CGCCTATTAG ATTTCGTTAC CCAAAGTTTT CGATGGAACG GCCGTGTAAG ACTTCGTTGA CTGAATCCTG CAGCCCTTCC GCCTCACATA AATTGATGCA GATAATTTAA ACGCCGACCT GGTATTTTTA TAAAGTATTG CATTTTATCT AC
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Protein sequence | MKVCSVLFIA LVAVASATET QPERHLAAVC KPKNLDFSQF SNGEFIDNVN EIPGFGVKID VKTGSPGKCQ SPKAQIIDTE GDLADGCGSD PVDSDLSSNF LGKAVIIGSK GTTCVANDCR FGGTVTFTFS KKINLKYFDL LDIDEDISAT LTFFDDSVVE LGSAPIIGDN GFYRWSVNSV NVKKLAVKFK RSGAIPNVVW RECPGEPGTF GDPHFKTWAG HKFDYHGQCD LVLTSAPNAA EGKGLDVHVR ATHKKFFSYI SATAIRIGNE VFEVANHGKV YLNGNENIDF EKDVTISGYP IKFNDTPAPN GRLQTMYNVH LSEHERIEIK VFNVFISVKI RSPSAEHFMG SSGIMGDFYT GLMFSRDGQI LTNPDEFGAE WQVNADDGNI FRTVQEPQFP AKCLAPEPMD QSRMLRHGIT YQQAEEACNF WNEDKEACIY DILATGDLEM AGAY
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