| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43406 |
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| Symbol | |
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| ID | 7197425 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 363062 |
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| End bp | 366848 |
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| Gene Length | 3787 bp |
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| Protein Length | 1209 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177605 |
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| Protein GI | 219111707 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.738221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGTG GGCCACAATT CTTGGTGTCA GCAGGAAAGG TGGAGAGCCT TATCATCGAC
AGTACACAGT ACACAAGAGG ATATAGATGA GGACTTGATC GAGCTCGGCC GAAGTGCTCT
GGCTGGATAC TTTAACTTCC CTCTGGATGA CTGGCAGCTT AAGGCGGGTG GAGCGATTTG
TCAGGGCTGC AACGTAATTG TATGCGCCCC GACTGGTGCA GGGAAAACCG TGGTAGGAGA
AATGGCGCTC CTACATGCAT TCAACGGAGG TGACAAAGGA ATTTACACGA CGCCGCTCAA
AGCGCTCAGC AACCAAAAGT ACTCCGAACT GTGTGGTACC TTTCCAAAGC AGGACACAGG
TCTATCGACA GGAGATATAT CAATCAACAA AGGTGCTCGT ATCACAGTCA TGACGACCGA
AGTATATCGC AACATTGCCT GGCGCTCGTC CACACCGACG GCAACACTCA TGGGTACAAA
CGAACTTTTG GAGAATACCG TAGTTGTACT GGACGAGTTC CATTACATGG GACAACCTGG
GCGTGGAGGA GTCTGGGAGG AATCCATTAT TACTAGTCCC TCACATACCC AAATCGTAGG
ACTTTCGGCA ACATTGTCGA ACGCTGCTGC ATTGGCGGCG TGGATGGAAC ATGTGACGGG
ACGTAGAACA ATCCTGGTCG AGGTTCCGGG ACAAGAACGA CCTGTGCCAC TGCGATATCT
GTTTGCTACT AAGGAAGCGC TTTATCCCTT GTTTAGGGAT CCAGACGCAG GTCCCGGTGC
GCCCAAGGGG CTACTGGGAT ATCGGGGAGA CGGCGATCTC CCGTCAAACC GTCAATCAAC
CAAAAAAGCA AAAGGATTTA CTCATATTAT GGACGGTGAT GATGTTGATG ACGATGAAAC
AAATATTAAG ATACCACGTG GTCTGCAGAT AAATCCCGCT CTTAAAGCTG CTGCAAACAA
GCGAATGCAG AAAGTGAATC GTGCAATTGA AAGGCAAAAA GTACGCCGTC ATTTGTCCCC
ACAAGAGGAC GAAGATGACT GGGGCGGCCG AAAGCGGAAT CAGTCGTCAC GGAAAATGTC
CCCACGAGAC GAGCGGAAAG AGCGCGAACG ATTGTTGAAA AATGAAATGC GCCGGTCCGT
GCCGTCTTTA CCTGCTATTT TGAATAGACT AAAGCAAAAG GAGCTCCTTC CGGCAATATT
CTTCATCTTC TCTAGAGCTG GTTGTGACGA CGCTGCCAGA CAAGTATATC AGTACATGAA
GGGTCCGCGA GACCCGAATT GTCTATTGCA AGACGAAAGG GAACAGCTTG GCATCAAGGA
AGAGCAAAGA TACGGAACCA AAAACGGGAA GTCACGTCAA AGAGCAGTTC AGAGACGAGG
TGACCTCGTC GAGGATTCCG ACGGGCGGAC ATTTCGATCT AAAAGCAATT TTATCAGTGA
ACAGACCCTG AATGCGTTGG AAATGTCGAC GCCACTGGCG GACGACGAAT TTGACGAAAG
CTCACCGCTA TCACCCGATA ATTGGGATTT TTTTTCGAAA GCTGGGCTTT TAAGCTACGC
CGAGGTTCGA GACGTTGCAT CCAGAGTGTC GCGCTTCAAT GCAGGCAATC CCGAAATTGC
GTTTGAGGAT GAAGTGATTG AGCAGTATCT TTTCGGCGCT GGCTCTCACC ATGCTGGGAT
GCTCCCAGCT CACAAATCGT TTGTTGAGAT CTTATACCGG AACCAACTAA TGAAAGTCGT
GTTTGCAACT GAGACTCTTG CAGCTGGTAT TAACATGTAA GTATTTAGTT TTTGGTCATG
AATAATCGAG ATCAAGATCC TGATCCTTTC CTTAATCAGG CCAGCGCGAA CGACAGTCAT
TTGTGCACTT GCTAAACGCG GTGATAATAG TGCGATGAAC CTCCTGGAAA CATCAAATTT
GCTTCAAATG GCGGGTCGTG CGGGTCGTCG GGGAATGGAT ACAGATGGAA CTTGCGTAAT
TGTTGCCACG CCTTTTGAAA ATCATGATGA GGCTTCCAGG ATCCTTATTG ATCCAGTTAA
ACCAATTTCA AGTCAATTCA GCCCCTCGTA TTCTCTCGCG ATCAATTTGA TTGCTCGAGG
AGAAGGGAAG CTTGATGTTG CGCGGCAATT GGTCAGTAAA TCTTTCGCAA TGTGGGAAAA
GCGTAAAGTC GAGCAGCACG TTGTAGATGC TGTGGAAAAT CATGGGGATG ATGTAAGCCA
GGCTCTCAAA GTGTCTGCGC AAGACCGATT CATGAAAACT TTGGTAGATG CTCTTCAATC
ACAGGTGGAT CAGAGAAGTG CTAAGTTTGA TGTAAACAGA GTGGAATCTC TTCTGGGAAT
CCTTACAGAT CGCGACTCAT TGAAAAAGAC TTCAAAATCT TTCGTCGGTG CTACCAAAAT
GTTCGAGCTT GAGTATACAA CACTTTCGTA TTTACAGAAG GAATACGACG CGCTCCGAGC
TAGGGCTGAG ATCGAAGACA GTGACTTCCT CAGTGAAATT ATTGCTGAAG ATACCAAGGA
CTTAATTAAT CAGATTGAGA ATCAAAGAAA GCGCGTCGAG ACTACCGAAA AAGAAATTGG
GAAGCATCCA TTCTCTATCA TTACGGGTAT TGCAAATCAA ATTATGGAAG ATGCTGCTTT
TCCTGAATCA ATCGTATTGA ATAAGGCACT TGGCAGTGCA CGGGAGGGGC ACAAACGGAC
CGAGTTGTCG TCATTGACAG CTCAGGAATT GTCTCAGTTT TCAAAGTCAG CCATCATAGT
TACTCGTAAA ATGCGGAAAG TCAAAACGGC CAATCCAGAC GTTGAAGATC TTTTTCAACA
AGCTGAAGAC CTAAGAAACG ATTCGTGGAA TGACATGCTT TCCATTACCA AGACGCTGGT
CGCATACGGC TGCTTATCAA TTGAACATAC TTTAGAAGGG GGCGAGTCGT ACGAAGACCA
GCAGTACACG ATATCTCCAG CCGGAATCAA CATTGGTATG CTCGGCTTCG AAAACTCATT
GTGGGCGCTG GTTGCCATGG GTGGTGCTTG GGACGTTGTG GGTGCATCGG CCAAACTCGA
CGATTTCCGT ACTGCCATGG AAGATTTTGA CAATGACGAA GACTGGTACC AAAATCGAAA
GGGTAACGAT GTTCTTATTC CGCCAAAAGT TGTTTCAATT CCTATTTCGC AAAAGGAAGC
CGATACGCTT AATGGCTTGC TCCGAGCCAT GGACCCCAGC GAATTGGCTG GCTACGTGGC
CAGCATAGTG ACAGACAACT CTCGTGGGAA TGGTGCACCG GTTGTTCAGC TCTTCCAAAA
TTTAACCCCC CTTCAACAGC GCGTCATTCA AAGTTCACTT GTCTCTATGG AGCGCCTTGT
AGAAGTGCAG AAACTTTATG GTGTAGATGA AAAGACACGA AGCTGCATAC TCGACATTTC
CAATTGTGAA GTTGTCACAG CTTGGGCCTC TGGTTGTTCC TGGCAAGAAG CTCTGGAGAT
TTCGGGGTCG CCACCAGGAG ATTTGGCCCG TACTCTTTCA CGCGTATTGG ATGCAGTCCG
ACAACTAGGG AACATGCCGT ACAGCCCCAT TCGGAAACAG GAACTGTTGG ATGGTCCTGT
CGTCTGGGAC GTTTCGCGGG GATTGCATCC CGAAATTCGG CGGCTATGTC GAGACGCTGC
TCGTTTGATC AACAGGTACC CAGTCAAGGA CCCCTTACAA TTTGAAGAAT TGGATGACGA
AGATGTCGAG ATATTGGACG AGATAGAGCA ATTTTTCGAG GAAGATGAGA TTGAGTCAGA
GGCTTAG
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| Protein sequence | MSRGPQFLVT QEDIDEDLIE LGRSALAGYF NFPLDDWQLK AGGAICQGCN VIVCAPTGAG
KTVVGEMALL HAFNGGDKGI YTTPLKALSN QKYSELCGTF PKQDTGLSTG DISINKGARI
TVMTTEVYRN IAWRSSTPTA TLMGTNELLE NTVVVLDEFH YMGQPGRGGV WEESIITSPS
HTQIVGLSAT LSNAAALAAW MEHVTGRRTI LVEVPGQERP VPLRYLFATK EALYPLFRDP
DAGPGAPKGL LGYRGDGDLP SNRQSTKKAK GFTHIMDGDD VDDDETNIKI PRGLQINPAL
KAAANKRMQK VNRAIERQKV RRHLSPQEDE DDWGGRKRNQ SSRKMSPRDE RKERERLLKN
EMRRSVPSLP AILNRLKQKE LLPAIFFIFS RAGCDDAARQ VYQYMKGPRD PNCLLQDERE
QLGIKEEQRY GTKNGKSRQR AVQRRGDLVE DSDGRTFRSK SNFISEQTLN ALEMSTPLAD
DEFDESSPLS PDNWDFFSKA GLLSYAEVRD VASRVSRFNA GNPEIAFEDE VIEQYLFGAG
SHHAGMLPAH KSFVEILYRN QLMKVVFATE TLAAGINIAM NLLETSNLLQ MAGRAGRRGM
DTDGTCVIVA TPFENHDEAS RILIDPVKPI SSQFSPSYSL AINLIARGEG KLDVARQLVS
KSFAMWEKRK VEQHVVDAVE NHGDDVSQAL KVSAQDRFMK TLVDALQSQV DQRSAKFDVN
RVESLLGILT DRDSLKKTSK SFVGATKMFE LEYTTLSYLQ KEYDALRARA EIEDSDFLSE
IIAEDTKDLI NQIENQRKRV ETTEKEIGKH PFSIITGIAN QIMEDAAFPE SIVLNKALGS
AREGHKRTEL SSLTAQELSQ FSKSAIIVTR KMRKVKTANP DVEDLFQQAE DLRNDSWNDM
LSITKTLVAY GCLSIEHTLE GGESYEDQQY TISPAGINIG MLGFENSLWA LVAMGGAWDV
VGASAKLDDF RTAMEDFDND EDWYQNRKGN DVLIPPKVVS IPISQKEADT LNGLLRAMDP
SELAGYVASI VTDNSRGNGA PVVQLFQNLT PLQQRVIQSS LVSMERLVEV QKLYGVDEKT
RSCILDISNC EVVTAWASGC SWQEALEISG SPPGDLARTL SRVLDAVRQL GNMPYSPIRK
QELLDGPVVW DVSRGLHPEI RRLCRDAARL INRYPVKDPL QFEELDDEDV EILDEIEQFF
EEDEIESEA
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