| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43394 |
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| Symbol | |
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| ID | 7197422 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 330003 |
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| End bp | 334359 |
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| Gene Length | 4357 bp |
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| Protein Length | 1071 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177912 |
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| Protein GI | 219112321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.560278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACAGCACTT CCCTCCGCAA TGGTGGAGCA CGTTGTCTCG GATTGGCCAG ACGACTTGCA
TCGCGTCTTA AACGGCACCG TTGCCACTAC TGTCACCACG AATGACGATG ATCTGCTCAC
ACAGAATGAT TCCAGCATCG TCCGCGAAAC CTTTCGAATA TACGGAACCT TGTATATTTC
TGCCTTTGTG CTGTACGCAA TTTTGAGACG GTGCTATCCG TGGCTGTTCA ATGTACGCGG
CTGGGTTCCA GAGCTACGAT GTGATCTAGC GCAAACGAAA TATGGACTCA TATCGTGGTT
CTGGAAAGTC TTTCGCGTGA AAGACCAAGA TATCTTTGAG CAATGTGGAA TGGACGCCCT
TTGTTTCATT CGAGCCATGC GCTTCGGTCG TAATCTAGGC CTTATGGGAT CCTTCAATGC
TCTGTGGCTG ATACCGGTCT ATATGACAGC AAAGGAGGCG CCCGAAACTG AGTATCTGAA
CGATTGGCTG ACAGAAATTT CGGTCGCACA TCTTCCGAAC AGGTCATCAC GCTACACTGG
AACGCTGCTG GCCACCTACA TTACATTTCT GTTCACAATG TACTTGATTC TACAAGAGAT
GCATTGGTAC ACGTACTGGA GGCATCGCTT TTTATCACAG AGGGAACCCC GAAACTACGC
CGTATATGTG GCAGGAATTC CTGACGAGTG GCGCAGTAGT AAAGACCTGA CCGCTTATTT
TCATAACTGT ACTTCAAAAG ACTCCGTTTT GGAAGCACAC GTTGCGATGG ATCTACCGAG
CTTGGAGGCA AAGCATTTAC GACGAGGTGA TGTCGTTCGA AAGCTTGAGC ACGCCGTGGC
TTTGGAGAGA AGGACGGGAA CTACTGAAAA GCACCACACT ATCAGCCTCA GCTCCGGTAT
CGAGAAGGTA AAAACTGTTG CAGCCTTAGA GGCGGAACTG GAGAGATTGA ACCGCGAAAT
TCCGGTAGAT ATTCAGAGAA TTAAAAGAAG CAGTGACCGA GATATTTCGC TGCCGTCTAG
AGCAGCCGGA GTACGCGATT TGATTGGAAG TGGCAATGCG GACATCGATT GGTCCCCTAT
CGACGATCAA GCCACTGACC ACGATCGACC TGCAGTTGTC ACTTTTATTG AGATCGAGAA
TTCAGACCCG GACAAGCCTA TAGCCATTAT TGATGAAGAC TACTGTCCTC GAAAACGGAA
TTTGACGATG GTGGATGAAT ACGCTGACTC AGATGTCGAA ACTAGTGATG AATCTGAGAC
TGCAGACGAT ACTTCACCGA AGCATGATAA CAAAAGTGTC TCGTCTACAG TCAATGGAAA
TTGTGTTGCG GCGTCGACAT CAGAGGATGC TGAGTACGTC TTGCAAAGGT TCTCTCGCGA
GGACGGTAAA ATGTTTGAGG AACACCTTGG CATGCATCGT GCTTTGCATC GGCAAGATCA
AATATCTGGT CTCTCTTCAT CCGACATTGA TATTGCAGAT ACTACGGACA TTGATGAGGA
CATTATTCGT TCTGCGGTGG GAAGACTCGT TGTGGAACGA AGTCGGTGTT GCTCTGAAAA
TGAGAGTCAG GGGGACACCA GCTCATATGA CGGATTTAAG CGTGAGTCTA GCAATGACAG
TTCACAGTTT CAGTCGCGAT CGAGTATTCG CTCTGGAGCA AAACAGCGTC CTTCTTCTCG
AGGGCGGAGC CGCTCCGCTA CAAGGAACGA CTCCGAGCGA AGCGATAGGT CTCGATCAAA
CTCCAGGATT AGAAATTCAA TCTCAGCAGG TGTAGAGGTC GTAAATACCG GGACTCGGGC
CCTGGGTCAG TCACTTTCAG TCGCAGGAAA CTCGATTACT TCAGGCTCAC AAGCTGCTCG
CCAATCGTTT GTGGCAAGCT CCAGAGCCGC AGGCGGAGCG ATTAAAAAAG TTGCGAAAGA
TGTCAACGTT GACAGGGTCA TTAAATCAGC GGCCGAAGGC GGAGCACAAA GTATCATCAA
AGTAGGAACA ACAATTGTCG CGTCTGCCAG TGCAGTTGTT CCTAGTCTCC GAATTAAAGG
AGAGGGGTCT ACGAGAAACG CCGGTTTTGT TGTCTTCAAG AATCTTTACA CAGTACAAAG
CGTTTTGCAA ATGGTTCACG ATGCGCGTCC TTATGTTATG GACTGCTTTG AAGCGCCTGA
ACCCGGGGAC ATCTTTTGGA GAAACGTTGG TCTCGTTGCA AAGGCACGCC GTGTAGGAAA
TCTTTTGAGC GTCAGTGCAA CGGTTGTTAC GTGCATCTTT TGGTCTATTC CGATGACAGT
AATCGCATCT TTAACAGAAG TGAACTCCCT GAAAGAAGAG CTTCCCAAGC TGGGTCGTTT
CATTGACAGA CACCCTAAAG CTGAGACTGT CATAGTGCAG CTTGCACCCC TCATCCTCTT
GATATTCAAT GAAACTATTT TGCCCAGTGT CCTCAAATAT TTCGCTCGCT GGGAAGGACA
TATTTCGGCA ACCATGCTGG AGGCATCATT ATTTGTTAAG CTTGGCTTTT TCATGGTGAG
AAATATAGAC AGTCCGCAAC ATGACGATTG CAACGATGTG CTAACAATTG CGGTATTTGT
CGTTATATAG ATTATTCAAA CTTTCTTTGT CTCGGCAATC TCTGGAGGAA TTACATCGGA
ACTATCAAAT ATACTGTCAA ATCCAGAGAT GATTATCGAT TTGCTCGCGA ATTCGCTCCC
TGCCCAGTCG ACATACTTTG TTCAAATTAT TCTTGCGTCA ACATTTCTGC TTCAATCTCT
TGAACTTCTA CGGGTCTATC CGCTCGGAGT TGCATTGCTA CGCCGCTTTT TTGGACCGCA
GCTCACGGCT AATGAGCGTC GCCGAACCTG GTGGTGGCTC AATTCTCTCG AAGACCCACC
GGACTTTTGG CATGCAGAGA CTTTCGCACA AATCATTCTT TACTTTATGG TGTTTTTTGT
GTACGCTGTG ATAGCTCCGT TTACGTCCTT TGTGGTGCTC CTGTGTTTCA CAATTTTGGA
AAGTGGATAC CGGTATCAGC TTATTCATAA CTACCCAAGG GCATTTGACA CGGGTGGGAA
ATTGTGGTAC TACTTTATCC AATTCATCCT GGCAAGCATG GTTATCGCTC AGCTTACTCT
GATTGGTCTG ATGGCTCTCA AACAGAGCAC ATATGCCAGT CCAGTTCTTA TTCCTCTGCT
AGTTGTCACC TGCTGTAAGT CGTGTCTCTT GTGATGCTTC TTTGAGCAGC CGCTTTTCCT
AACCAAGCTT TACTCTTGAC AGTATTCATA ATCTACATTA ATTCGCGGCA TTCAGTGGTC
GCACGTCATT TACCAACAAG AAACTGTATT GAAGCAGACC AGCATTACGT ATTGGTATCT
GAAGATGATG AGGAAATTGG TGTCCACCTC AGCGATTTTA CATTTGTGTA CGGTAAATAT
CTTCAGCCGG CTCTTCAAAA CGAGCAGGTC TGTCCGGACT ATGAAGACGA TGAGTACGGT
GACGCCCCGA ACAGTTTGGA TGGCCAACAA TTGGACGACG ATGACTTGTC TATTCTCGGG
CAGTAGCAAA TACTTCTGTT TACAGTTAGA CGCTCTCCTT TTTACGCGCC ATCGAATCTG
TCTATAGAAA TTGGTTCACC AACACATTTT GGGCTCATTT GCTATCGGTA AACACACCAT
TGTCTCCAGT ACCATGACCA CGATACTATA ATCAGATGTA CGCAATTTAT TGTTCTAAGC
GCGAGGAGTA CGGAAAGGAT TTATACGAGC AAAGATACTT TGGCCCCGGA AATAATGCAT
AAAGGCAGCC CCTGCGTGAA GAGGGACGAG ATATTTTCCG TAGGTGCCCA ACGTTTTGTG
GATGTTGTAA GTCTGTTTTG CGATTTGCCC GTTGCGCTTT TTCTCGAGAT CGTCGGCTGG
AGTAGCACCC TCGAACGTTT TGTAAAAGAA AGGCAACCCC TTACCACCAT AGTAGCCCAT
AGCGATACCG CTTGCCGGCA TGATTGTCAT GAATGCATAG AGGCCGTAGT GCGTGACCTT
GCTAGCCGCG TTTTCCCAGG TCGCGTTGCC GATCATGTTT CTGACGTTAT AGTCGGAACG
AGAAAGCAGC CGATAGGCGA ATCGAGGCGC CACAACCATA CCAGTCAATA AACCGAGCGA
TTTGTGACGC CACATCCATT TGCCTTTATC TTCCTTAGCG GCATCTTGAG CCTTCAGCAC
GGATCCAACA GAACCGATCA GAGGAATCGC AACCATCCAA TGAAAAGCCG AAGCCGTCAA
CGAATACGCA CCCGCGGGAA CAACACTCAT AACAAAGGCG ATTGAAACAG TATTCAGTTG
AATAGGGTCG ACCGCAATTT CATATAAGAT AGGGGAC
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| Protein sequence | MVEHVVSDWP DDLHRVLNGT VATTVTTNDD DLLTQNDSSI VRETFRIYGT LYISAFVLYA
ILRRCYPWLF NVRGWVPELR CDLAQTKYGL ISWFWKVFRV KDQDIFEQCG MDALCFIRAM
RFGRNLGLMG SFNALWLIPV YMTAKEAPET EYLNDWLTEI SVAHLPNRSS RYTGTLLATY
ITFLFTMYLI LQEMHWYTYW RHRFLSQREP RNYAVYVAGI PDEWRSSKDL TAYFHNCTSK
DSVLEAHVAM DLPSLEAKHL RRGDVVRKLE HAVALERRTG TTEKHHTISL SSGIEKVKTV
AALEAELERL NREIPVDIQR IKRSSDRDIS LPSRAAGVRD LIGSGNADID WSPIDDQATD
HDRPAVVTFI EIENSDPDKP IAIIDEDYCP RKRNLTMVDE YADSDVETSD ESETADDTSP
KHDNKSVSST VNGNCVAAST SEDAEYVLQR FSREDGKMFE EHLGMHRALH RQDQISGLSS
SDIDIADTTD IDEDIIRSAV GRLVVERSRC CSENESQGDT SSYDGFKRVE VVNTGTRALG
QSLSVAGNSI TSGSQAARQS FVASSRAAGG AIKKVAKDVN VDRVIKSAAE GGAQSIIKVG
TTIVASASAV VPSLRIKGEG STRNAGFVVF KNLYTVQSVL QMVHDARPYV MDCFEAPEPG
DIFWRNVGLV AKARRVGNLL SVSATVVTCI FWSIPMTVIA SLTEVNSLKE ELPKLGRFID
RHPKAETVIV QLAPLILLIF NETILPSVLK YFARWEGHIS ATMLEASLFV KLGFFMIIQT
FFVSAISGGI TSELSNILSN PEMIIDLLAN SLPAQSTYFV QIILASTFLL QSLELLRVYP
LGVALLRRFF GPQLTANERR RTWWWLNSLE DPPDFWHAET FAQIILYFMV FFVYAVIAPF
TSFVVLLCFT ILESGYRYQL IHNYPRAFDT GGKLWYYFIQ FILASMVIAQ LTLIGLMALK
QSTYASPVLI PLLVVTCLFI IYINSRHSVV ARHLPTRNCI EADQHYVLVS EDDEEIGVHL
SDFTFVYGKY LQPALQNEQV CPDYEDDEYG DAPNSLDGQQ LDDDDLSILG Q
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