Gene PHATRDRAFT_43378 details

Gene Information

• Locus tag: PHATRDRAFT_43378
• ID: 7197411
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 286832
• End bp: 292890
• Gene Length: 6059 bp
• Protein Length: 1934 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177591
• Protein GI: 219111679

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGCTG CGGAGCGCTA TCTCGCTTCG GGGAAGAGCG CCAAGTCGTC CAACACCAGC 
ATGTCACTTT CGGTGGACTA CGGATACGGT TCGGTATCAT CCAGTAGCGA TACCAACGCA 
TCCCCGAGCT ATAACGGGCG CTTGGAAATA GAGCTGGATG GTAAACAAGG ACCTCAGCGG 
CGTGCGCAAC GACGATCATC CGCTTCGTCA TCACGGAGAT CATCGACGAG CTCAATGGGG 
TATTACAAGC AATCAGATGA TGATCTAGAA GAAAGTCTAC ATTCATACGC TGGGGACAAC 
GGGTCAGCCG ACGACGAGGA ACAACACCTG AAGGAGCCGT CTTTCATGAA AGCGTTGCGG 
AGGGGATCTT TGTCAAAGGA TGAGAGTGAA ATCAAACTCA AGCAGTCGCT TTCCAAAGTG 
AGCGACTACG TAGATCCACA TGACGATGAT CGAATTCAGT TGATGAAGGA ACGCATTAGT 
CTCAGCAAGC AGCTGCAGAA TGTAGCGGGC ACCCCAAAGA AGCGCGAACA GCGCTTCGGA 
CGTCGGTCGT CCATTGAGTC CACCAGTAGT AGTATGTGCT CCTCGTTCGC TCCCGACACC 
CCGACCCGCA CACACTCTGG ATCATTATTT AAAAGCTTGC AAATCTCCTC AGCCGAATTG 
ACTGGCATCG CTTCCAGCGT CCGACATTCT GATTTATCGT CATTCAATAT GTCCACGAGT 
ACAATTCCGG TCACGAATGC TGTGAGAACT GATGAAGGCC GGAGACGCAA GCACGTGGTC 
AAGACGGATC AAATAGTAGA ATCGTTGGTG TGGTTTTCCT TTCATACCCC ACGTGCCGTT 
TTGGAAGATC TCATCAAGCA CGAAATGGAA ATCTGGCGTC GCCAGAGTCT ACAGCCAAGA 
AGGGGCAACT CTTTGCCCAC CGAATCTGCG CTTGGCAAGT CGTTACTAAC TCCGTTGGAT 
GACGAAATGG ATGACCATAG TTTGAGCTCC CTATCTGAGG ACGGCAATGC CCGTATAACG 
CCAGAACCAG GTGACAAAAC GTTTTCGCAA ACTCTTCAAC GAATGAAACA AGACACGAGG 
TACGGAAAAT TCGACATGAT AAAGTTACCC AAAGCTGTTG AACGGGAAAG TGCTTTGCTG 
TTTGTTGACA TGTCAGGATT TACGAAGTTG TCCACAATGT TGGACGTGGA ATCACTTTCG 
AGGGTCATTA ATAGCTATTT CGACATGATA TTGAGCGAAG TCATCTTGCA TGGTGGCGAC 
ATTCTAAAGT TTGCCGGTGA CGCGTTCTTC GCTGAGTGGA AAGTTCTGAG AGAAGAAGGT 
TGCGATGCGG AAAAGGCTGA AACTACGAAC AATCCTCTGG CCGACCTGAA TGCGTCCTTG 
GCATCAATCA ATGAAATGGC GTGGCATGAT GATATTGACC TCCCAAAACT ATCGACTTGC 
GTTTTGTCTG CTGCCAAGTG TGCAACCGCT ATTGTGGCAA AGTTTAGCGA CTATCAGGTC 
ACCTCGGGAT CTGCTGGTGC TACGGGGGCT ATGCTCAACG TCCATTGTGG TATTGGAGTG 
GGGCAGTTGG TGGGCTTGCA CGTTGGTGAC TATAAAGAAA ATCAGGAGGA AGACGGCGTT 
GAACTTCGCC GTGAATTTTT GATTCTTGGT GAAGCGATTG ACCAGGTATG CTTTCTACTC 
GCTTAATCAT CGATTTGTAT GTTTCACCTC TTACACAATT ATTTTGCTCC GTAGGTATCC 
ATAGCAGCTG ATGTCGCCAC AGACGGTCAA GTTATGGCGT CACCCGAGGC AATGCTACAT 
CTTGCCTTCT GTTGCGATAT GCCCGACTCC GCTCACAATT CTACCGATCC TGTTTGCATC 
GCATCTCGTG GGCAGGCTTT CTTGCAGTTC GATTCGGATT TTCAAGTGGA CGGCCAATTG 
CCTTCCGCCT TGCTTCCTTA CGAGTCGCTC CGGCTGCATT GCAGAACCTT GAACCATGAG 
GCTTTAGCCC GACTACATCT TCAAATGGCT CTATATGTCC ACCCCGTGAT TCGTGCGGAT 
GAGCTGGCTC TATCCACTGC CATACAGGCA GGAAAAATTT CTCAGCCTAC AGAAGCCCTC 
GAGAGTCGCC ATCGAGCAGA GGCAGAGCTT CGATCAGTTT TCACAATTTT TATCAAGCCC 
ATCGTTTTGC CAAGAGTGAC GGGGATGAGA GAAGTCGATG AAGAATTATT CAAGACTCTT 
GCCGATATCA TGCATATTAC TTCTCGTGAG CTTGATCGCT ACAGTGGACA TCTTCGACAA 
TTTATTGTTG ACGACAAAGG TGTTGTTCTT CTTGCAACTT TTGGTCTAAG GGGGTCGACG 
TTTCCAAACA TGGTTGCCAA TAATGCATTG CCAGCTACGT TTGCGATTCA TCGAGCATTG 
AAAACGGAAA TAAATGTTGA AAGTCGCATT GGCGCTACAT TCGGAAAAGT GTACTGTGGG 
GTCGTTGGGG GTGTTAGAAG GCACGAATTT GCGGTCATGG GTGCTCCAGT GAACTTGGCA 
GCTCGACTTA TGAGTTCGAA GGTCAACAAT GGTATTCTTG TCGACGAGGC AGTAAAAGAA 
CAAGCTGGTG CTAACTTCGC TTTTCGAAGC CTGCCCCCGG TTCAAGCGAA GGGTTACGAC 
AAGCCGGTTC CAATTCTCGA ACCGTTACAT GCTGTCAACG TCGGAAAAAA GAAGAAAGTC 
TCATACCCTT TTGTTGGCCG AAGGACGGAG AAGGAAAAAA TTCTATCGAT CACTTCTGCA 
ATGTACAGCG GCATACCAAG TAGTGCTATG ATATTTTTGA TGGGAGAGAG TGGTACTGGC 
AAGAGCTCAC TCTCCACGGT CGTTATCGAC GAGATAAAAA AAAGATGCGT TATTTCTTCG 
AAAACGATCG TGTCTGCAAG ATCAACTAGT ACTGAAACAG AGCAGAGAAT CCCACTCAGG 
TATGAAAATC GAATTTCAAT AACCAGTTAT TGGCTGATAG TCATCAATGT ACTCACCTTC 
GTTTCATTGG ATGTACCCTA GTGCCTATCG AAAGATTTTG CTTAGTATCA TAAGAGATTT 
ATGCGAGCAC GATGGTACAT GCGAAGACTG GTGTGGAGAA AGCCCTGGTT TTGACAACCG 
AAGCCATCAA AGCGTATCAT CGAAGTCATC GTTTGCTGGA ATACCGCTCA CGTCGCTGAA 
AGCTCTATAT GCAATGAGAG GAAGCTCACG GTCAGGACTA AAGAACAGGG ATTTTGCGAC 
TACTTCACAG GGTGAAGGTG ATTATAGAGC TTCAATAATG CGGTCTAGAG GGCTGCGGGA 
AATCAGTGAT TCAGAAGAAG CATCTTTAGA ATCTTCAGTG CGATCAGAAA GTAGCGAACA 
ATCACCGAAG CGTGTCAGCC AATCACTTCG AATCCTTGGT GAAGCCCTTG CCAATGGGAC 
AACAAGACCA ACCAAGAAAG ATTTTTTGGC TCCAAATTTG AATGTATCAC TCCACCGCGC 
AACGTCCCGG CCTACGAAAG GTGATTTCTT GCCAAGCAAC TTGAGTGCGT CAGTGCACAA 
CTCAATGGAT GCGAGTAGAC ACAAGAGCAA GCGGGAACCC CTATCCAACT CTCTTCATCG 
GATTACTTCC GAAGAGCCGA AACTAAGTTC CAAAACACGA CTTGGCAGGG ATGATACCAG 
CATCGCTAGC GGCGAGAACA GCACTCACAA GCATGGGGTT GCCGTTCCAT ATTTCGAAAA 
GCTGTGTTGG GTATGTGAGA AACTAGACTA TCCATACGAA TATGCTGACC TTGTGGGATC 
TCAGTTCCTG TCACTGGACG GAGCAAGTCC AGTCACGCAT GTCGACGGTC ATGTGCCGAC 
AATGGACGAA TTGGTCGAGT TCCTTGCTCT GGCGTTTATC TGCATTACAG AGTACGCTGA 
TATTTCTGTC ATCTTAATTG ATGACTTCCA GTGGGCTGAT TCGTTTAGCT GGAAGATTTT 
TCGAGAGCTT TGTCAACGAG GCAACAAACT GCTGTTAATA TGCGCAATGC GCTCTCATGA 
TAAGCAAGCG CTCAGGCGAC TCTCAACTGC TGTAACTCAA CGAAGCCAGC TCCACTCAAA 
AATGACCGAA ATATCTTTGA CTTCACTCGA CACAGACGAC ATTCGAGAGC TGATGGCCCA 
TGTTCTTGGA CACAAAGAAG AGCTTATTCC CGAATCGCTT TGCACAGATG TTTTTCAAAG 
GACTGGAGGT TTGCCTGTAT TCGTCATTCA GGTTCTCGAA AATATCAAAA GGGCAAAAAC 
AGTTGAGCTT GGCGAAGATG GACGATTGCA ATGGAACGCT GCAGGTTTGA AAGAAAAGGT 
AAGGTCACGC GTGCTATGGC CGATAACTTC AGTTAATTCC CGTCTTACGA GCACAATTTG 
GAATATTTAG AGAGCGATTG GATCAAATAA AGCAGGTGCA GTAATGGAAG AGACTTTTTT 
GAGCCGATTT GACGGCCTAG ACGTACAGGT GAGGAAAGTC CTTCAGACTT GTGCAGTTCT 
CGGGTTGACA TTTTCTTTTG CAGACGTCGT TCAAGTTCAT CCAGAGATGG AAGAAGCCGA 
CATTGAATAC GCGATGTGCT CCGCTGTTGA TGAGATGGTT CTTGTGGAAC AAAATGACGA 
AGATGAAGAA AGAACTTTAA TCTCTGCTGC CAGCAACGGC GACTTCGATG ATTCAATATC 
GAATTTCCTT GCCGCCAGTA GAGCCTCGAC AAGCGGCAAA ACGCACGATG AGCGCTTTTT 
TCAATTTAGC CATGCAATGT GGAGAAAAAG CGTACTTACA ACGATGTTGA AGGAGAGAAA 
GATTGAAATA CATCGCTTGA TTGCAGAGGC TATGGAAACA GACAAAGTAT TAATCTTGGA 
AGAAAGCGAT ATAACACGAC TGCTTACTCT TTTTGACCAC TGGAAATCGT GCGGCGATTT 
TTCGAAGTCC GCGCCACTTG CATTAGTTGT GGGTGCTCGT TTGGAAGAAT GGGATTTGTC 
TGCACAGAGT TTAGAACTCT ATGAAGACGC TTTAAGTATG GCCTTTGACA GCGTTGAAAC 
TCACGAGGAC ATGGAAGCTA TTAATGATGA ATGGGTACAG GTTTCCGCAA GACCAATTGT 
CTTGGATCTA ATTCTCCGAT TACATATTCG AATCGGGCTC TGTCATCAAC GTTTAGGTGA 
TGAAAGCGAA AGTATCGCTA CGTTCGAAGA CGCTTTCAAC ATTATGAACA CATCTTCAAA 
GTTTCCTGGT ATAAGCAGAT CCCTCATGAT GCCAATAATC TCCTCACTCT GTGTGCTCAA 
ACTGGAACAC GATGTACAAG ATAGTGAAGG CAAAGAAGAG CAAGAACAAC TTCTGCAGCA 
GTTTCTTTGC GAAGCGACTA TAAACGGTAA TCCTGTTCAC ATCGGTCGTG TTTTAGCACT 
CCAAGCAATG TATCATGCCA AAACTGGCTC CCTCGATCGA GCGCTTGACG ATGTTCATCT 
TTTACAGAAA AAGTATGACA TCCAAGAGAA TTCTTTCGAT ATGATCACTG AATATGGACG 
GGACTTTGCC CTTGAGTGCT TCTCGGAAAG TGTTCAATGG ATATATTTGC TTGAGAAACA 
TGACGCTGCA TCGGACCGTG CCGACTTAAT AATGGACCAA TACCTGACTT TGATCGACCC 
AATAGACGGC GAAAGTATGA TGGCGATCCT TCTGCCTATA CTGAATGTTC TCAAACTTTT 
GAACCGAGCA ACTGATGCAG ATTGGCTGTT GAAGCGACAT ATAATCAACC CGGCTCACGA 
CCAGGCCTTT CATTGTGACT TTTGGGTTCC TCTTTTTAAT CCACTAGCTT ATCTTCTCGA 
AGTTGTCGTG ATGGAAGAGA GCGAAGACTT TGACGAACAG GTGTTGCAAG AGATGGAGCT 
CTGGGTATTG GAGGAAGAAA ACAGCAAATT TGATTTTGAT CTTGAGTACA AGGCGCACAC 
GCTCATGGGG GAACTTTGCT GGAGGCTAGC CAACTTTAAA GAAGAGAACA ATCCAACCCG 
TGGACCGCTC ATTGACAAGG CGCGCGACTT TCTTACCCCG GTAGCGCAAT ACCCTCATG 

 

Protein sequence

MQAAERYLAS GKSAKSSNTS MSLSVDYGYG SVSSSSDTNA SPSYNGRLEI ELDGKQGPQR 
RAQRRSSASS SRRSSTSSMG YYKQSDDDLE ESLHSYAGDN GSADDEEQHL KEPSFMKALR 
RGSLSKDESE IKLKQSLSKV SDYVDPHDDD RIQLMKERIS LSKQLQNVAG TPKKREQRFG 
RRSSIESTSS SMCSSFAPDT PTRTHSGSLF KSLQISSAEL TGIASSVRHS DLSSFNMSTS 
TIPVTNAVRT DEGRRRKHVV KTDQIVESLV WFSFHTPRAV LEDLIKHEME IWRRQSLQPR 
RGNSLPTESA LGKSLLTPLD DEMDDHSLSS LSEDGNARIT PEPGDKTFSQ TLQRMKQDTR 
YGKFDMIKLP KAVERESALL FVDMSGFTKL STMLDVESLS RVINSYFDMI LSEVILHGGD 
ILKFAGDAFF AEWKVLREEG CDAEKAETTN NPLADLNASL ASINEMAWHD DIDLPKLSTC 
VLSAAKCATA IVAKFSDYQV TSGSAGATGA MLNVHCGIGV GQLVGLHVGD YKENQEEDGV 
ELRREFLILG EAIDQVSIAA DVATDGQVMA SPEAMLHLAF CCDMPDSAHN STDPVCIASR 
GQAFLQFDSD FQVDGQLPSA LLPYESLRLH CRTLNHEALA RLHLQMALYV HPVIRADELA 
LSTAIQAGKI SQPTEALESR HRAEAELRSV FTIFIKPIVL PRVTGMREVD EELFKTLADI 
MHITSRELDR YSGHLRQFIV DDKGVVLLAT FGLRGSTFPN MVANNALPAT FAIHRALKTE 
INVESRIGAT FGKVYCGVVG GVRRHEFAVM GAPVNLAARL MSSKVNNGIL VDEAVKEQAG 
ANFAFRSLPP VQAKGYDKPV PILEPLHAVN VGKKKKVSYP FVGRRTEKEK ILSITSAMYS 
GIPSSAMIFL MGESGTGKSS LSTVVIDEIK KRCVISSKTI VSARSTSTET EQRIPLRDLC 
EHDGTCEDWC GESPGFDNRS HQSVSSKSSF AGIPLTSLKA LYAMRGSSRS GLKNRDFATT 
SQGEGDYRAS IMRSRGLREI SDSEEASLES SVRSESSEQS PKRVSQSLRI LGEALANGTT 
RPTKKDFLAP NLNVSLHRAT SRPTKGDFLP SNLSASVHNS MDASRHKSKR EPLSNSLHRI 
TSEEPKLSSK TRLGRDDTSI ASGENSTHKH GVAVPYFEKL CWVCEKLDYP YEYADLVGSQ 
FLSLDGASPV THVDGHVPTM DELVEFLALA FICITEYADI SVILIDDFQW ADSFSWKIFR 
ELCQRGNKLL LICAMRSHDK QALRRLSTAV TQRSQLHSKM TEISLTSLDT DDIRELMAHV 
LGHKEELIPE SLCTDVFQRT GGLPVFVIQV LENIKRAKTV ELGEDGRLQW NAAGLKEKRA 
IGSNKAGAVM EETFLSRFDG LDVQVRKVLQ TCAVLGLTFS FADVVQVHPE MEEADIEYAM 
CSAVDEMVLV EQNDEDEERT LISAASNGDF DDSISNFLAA SRASTSGKTH DERFFQFSHA 
MWRKSVLTTM LKERKIEIHR LIAEAMETDK VLILEESDIT RLLTLFDHWK SCGDFSKSAP 
LALVVGARLE EWDLSAQSLE LYEDALSMAF DSVETHEDME AINDEWVQVS ARPIVLDLIL 
RLHIRIGLCH QRLGDESESI ATFEDAFNIM NTSSKFPGIS RSLMMPIISS LCVLKLEHDV 
QDSEGKEEQE QLLQQFLCEA TINGNPVHIG RVLALQAMYH AKTGSLDRAL DDVHLLQKKY 
DIQENSFDMI TEYGRDFALE CFSESVQWIY LLEKHDAASD RADLIMDQYL TLIDPIDGES 
MMAILLPILN VLKLLNRATD ADWLLKRHII NPAHDQAFHC DFWVPLFNPL AYLLEVVVME 
ESEDFDEQVL QEMELWVLEE ENSKFDFDLE YKAHTLMGEL CWRLANFKEE NNPTRGPLID 
KARDFLTPVA QYPH