| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43350 |
|---|
| Symbol | |
|---|
| ID | 7197397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 198796 |
|---|
| End bp | 200481 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177883 |
|---|
| Protein GI | 219112263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTTACGAAT GCTCAAGGCC TATTACGAAG GTCTAGTGAC TCTTGCCGTA AACTATTTAC
AGACAATCCA CACTCGACAC CAGGCAGAAA TGGACAAGCG AACTACTCGG TCGGACGATC
CAAGCTTCAC AAAAACTCCG AATCAGGCCT TTTCCAAATC AACCTCTTCA AGCCGTTCGA
CCGCTACGGT GCTCGGCGAG ACTTCCCGAA GGTCGAAAGC ACTGCAGTCT TGCCCTACTT
ACTAATGTGA AGCAAGCAAA GTCAAACCCA CACGTTCTTC ACAGAGCAAC ACACAATCCG
AAGAGGTTCC ATACTTGTTC GCGTTTTATT TTCCGAACGC TTTTTGCACC AACCAATATC
GACTTCGGTC TCCCAAACGC CAAAGAAGTC GCAACCGCAC ATTATTAGAC TCGACCCTTT
CTCCCACTGT CAATACAAAC CTTTACACTC ATTTCTCTCA TGTCGTTGAA AGCTTTACTG
GGAGGTGCCA TGATCGGCAG TGCTTCTGGA GTACTTCTAC TACTTACCGG AAATATTATG
GGAGCTTCTG GTATCGCATC GTCGGCTCTC CTCAAACCTA CACAATTGCT CACCGACCAA
TCTCAACACT GGAAGCTCGT CTTCCTTGCA AGTTTTCTGC TTACAACTAA TGTCTTCTTT
TCGGTCCCTT TCGACCGTTC AGATCCGGCG GCTGCTACCT TATCTCCACT GGGGTACGGC
TTGGCGGGAT TATTTGTGGG CTTTGGCACC AAACTCAGCA ACGGGTGCAC GAGCGGGCAC
GGCATTTGCG GTTTGGCCCG ACTCAGCAAG CGATCAATGG CAGCCGTTGC AACATTCATG
GCCTCGGCAG TTGCCACTAC CTACCTGACG CAAGTATCTC CCTTGCTCAC AAAGTTCACT
AGCGTGCTGC AAGTAGAAGC GGCGCAGCAG ACGCATTCGC AGCCTCTCCT CGGTGTGGCG
TCCGCTCTCA CACTCTTGTC TGTCGTCGCT TCAGCCGTGG CGCCATGGTT TCGGCAAAAA
AAGGACGAAA ACGGCCAGGC CCGCATTCTG CCAGCCATCG CCTCTGGGTC TATGTTTGCC
TCTGGTCTGT ACATCGGCCA AATGGTATAC CAGTCGAGGG TGCTTGGATT TTTGAATCTT
GCCGGTATGA CTGATGGATC CTGGGACCCA ACACTTGTCT TTGTCATGGG TGGTGGGGTG
ATGGTTAGCC TACTTAGCTA CCAGTTCTTG GAGGGGTATC GCATAACGCG AAGTACTACT
CCCGTCAAGC ATCCGTTGGC ACTCAAACCT GATGCTCCGT TTTGCATCCC CACCAACACC
CATATTGACG CTCAGTTGAT ACTCGGATCG GTGGCATTCG GTATTGGTTG GGGCTTAGGC
GGTATTTGTC CCGGACCCGG TATATTTCTC GCAGGGGCTG GGGTCCAGAA TGTTATTCTG
CACTGGTGGC CGTCCTACTT CGTAGGAACC TATATCGCCA ACGAAATTCA GAATCAACAA
TCCTAGGCCC GAAAAGAAGT GCCAATACCA CCCATTGAAA TTTTCCGAGG CAAATATGGC
CAAGCAAGTT GAGTCTGGAG GGTGAATATA GAAATGGGCG ATACACTGAG TAGCCACTCG
CCATGGCAGC TCGCCGAATT GAATTTACAT TAATCCCTTT CACAGTAAGC TGTTTCTTTA
CAAGAC
|
|---|
| Protein sequence | MSLKALLGGA MIGSASGVLL LLTGNIMGAS GIASSALLKP TQLLTDQSQH WKLVFLASFL
LTTNVFFSVP FDRSDPAAAT LSPLGYGLAG LFVGFGTKLS NGCTSGHGIC GLARLSKRSM
AAVATFMASA VATTYLTQVS PLLTKFTSVL QVEAAQQTHS QPLLGVASAL TLLSVVASAV
APWFRQKKDE NGQARILPAI ASGSMFASGL YIGQMVYQSR VLGFLNLAGM TDGSWDPTLV
FVMGGGVMVS LLSYQFLEGY RITRSTTPVK HPLALKPDAP FCIPTNTHID AQLILGSVAF
GIGWGLGGIC PGPGIFLAGA GVQNVILHWW PSYFVGTYIA NEIQNQQS
|
|---|
| |