Gene PHATRDRAFT_43323 details

Gene Information

• Locus tag: PHATRDRAFT_43323
• ID: 7197383
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 115960
• End bp: 116667
• Gene Length: 708 bp
• Protein Length: 235 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002177563
• Protein GI: 219111623

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00201805
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGCAT TGGCTACATC CTTGGGAGTT CTTGCTTATA TCTTCACTCT TATTGCAACG 
CTTGGATGCC ATTTTGTGAA AATCGATACG ACTGCCAATG TATCCGAACT TTCGGGACTC 
CGAACCGATG CGTCAGTGGG TGTTGGGCTC TTCTCGTACG ATAGGACCTA TTCCTTTTCC 
GTGACGACTT GTGATGACTA CACGTCTGAC CAAATCGACT CATTTGATGG ACCCTTTCGC 
GCCGCTCGCT TTTTTGGCTA CCTCTCCAAT ACATTCAACG GGGTTGCCAC GCTCATGCTA 
GTCGTGATGA GCTGCGTCAA CTTTGGAAAA ATAGTAGTCA AAGCCGTAGG CGTGTTGCTC 
TTGCTCGGAT CCCTTTTTAC GATGCTCACG TTTAACCTGT TTGCATCGGA GGTCTGTGAC 
CTGAACTGCG AGTTTGGACG AGGTGCTGGG TATGCGATTG GCAGCTCCCT CACAGCCTTA 
CTGACGGCTG TGATTGTCTT TTACGTTCCA TCAATCGAAA AAGCTCTGGA GCTGCCTGAG 
ACGCCTCCTG TTGCAGGCTT GGTACATCCT ACTTCAGCAC CATCAACAGC TAACTCTGTC 
TCCGAGTCGT TCCTGTCCGA AGGTGTAAAG AAAGTGACAA AAACCACAAT TCACCCAGAT 
GGATCCACGA CAGTCGAAGA AACTGTTGTC CGTATCGAAG ATGCCTAG 

 

Protein sequence

MSALATSLGV LAYIFTLIAT LGCHFVKIDT TANVSELSGL RTDASVGVGL FSYDRTYSFS 
VTTCDDYTSD QIDSFDGPFR AARFFGYLSN TFNGVATLML VVMSCVNFGK IVVKAVGVLL 
LLGSLFTMLT FNLFASEVCD LNCEFGRGAG YAIGSSLTAL LTAVIVFYVP SIEKALELPE 
TPPVAGLVHP TSAPSTANSV SESFLSEGVK KVTKTTIHPD GSTTVEETVV RIEDA