Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43312 |
Symbol | |
ID | 7197376 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 89697 |
End bp | 91943 |
Gene Length | 2247 bp |
Protein Length | 627 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177861 |
Protein GI | 219112219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTATTCCAAT ATGGATAGCT CAACGACCTA CTGTGATCTG AAAAACGAAA TCCCACGTCA AACTCTTGAC GCCGCCCGAG CAGGATAGAT CGTTTCCGAA AAAGGTATCC TTATGTCCTC ACGCGGTGTC GTCACTCGTT CAATCTGCGT TACACGGAGC GGAGCGTTAG CCAAAAATGT TCCCTGGAAC AACTAGATCC TATTGCTCGA AGTGTCCAGT GGGAGACCCA CATAAAATGT TTCGCTGTTC TAACAATATT GATTCATGAC AATCACGCCG CATCACCCAC CCCAATCGAA CGCATCCACC ATACCGGTTG CTACATCAGC CGATGCAATT GGATTAAGGG AATCGCTTGA TGAATATCCT AGCGACTGGT CACGGCACAA TCCATTTCAT GACGGCGAGA TTCAGTTGCA AAAGCTAGCC GGAACGCACC GTAGCGTTAT GTCGTTTGCG CCCAAGTTTA TCCGTCCTTT CCTTCCGGAG CAGCATCAAG AGTTTTATCG GGCGCAATCA TTCCTCGTCG CAGCTTCCCG AGATGCCGAT GGTAACATGT GGTCCACGTT GCTCGTCGCA AGCGAGGGGC CGAACCAGAG TCGCTGTCCA GGAGATTTTG CAAACCTCGT CGATTCGCCC GATCCGGTGA CCTTGCACAT TCGAACACAA CCCGTCCAGG GGGACGCCCT TTTCGGACAA ATTCAAGTCG ATTCCGACCT AGGATTATTA GGAATTGAAT TTGCCTCCAA ACGTCGCAAT CGGGTAAACG GACGAATCCT TTATTCGACA CCAAACGACG GCATGGTGTT GAGAGTTGAT CAATCTTTCG GCAATTGTCC CCAGTACATC AAACCAAGAA AGGAATGGTG GTGGAATGCT GAAAAGAAAG AAACGGAAGG AGCAAGCCCC ACCTTTTCCT CGTCAACCAA ACCTTCGCAT TTATCGGAAT TGCATATAAA AACAATCCAA GGCGCCACCA CTATCTTCTT GGCAACGGGA TATCGTGGCC AGGGAAAGGA TACTCGCTTT GGGAATGACG CATCCCATCG TGGAGGCCCC CCTGGCTTTC TTCTTGTGCG AGACAAGCAC ACAATAGTGC TACCCGATTT CGCCGGTAAC AATTTTTTCA ATTCGCTCGG CAATCTGGTC ATGGATTCAA GGATGGGTCT GACCATCCCA GATTTTGAAA GTGGTGGCAT GCTGCAATTG TCTGGACGCG CGCAGGTCGA AATGGATACC CACAAGGCTG CTTAGATTTA CCCCGGGGCG TTGCGGTTGA CCATGTTTTT AATTGAACAG GTCAACGTGG TGCCCGCGGG GACCTTTGCT ATTCGATGGT CGATTCCGTC AAAAGGAGAA TCGCGACTTT TGGAAGTTGT GTCCATTGTT CAAGAATCGG TCGACGTGAA ATCCTTCCAT CTGGCAGCCC CGGCTACTGT CTCTCCGAAT GACGATGACA AAACAAGCAA TCACAAGCTT TGGGGTTTCA AAGCTGGACA GCATTTGCCG ATTGAGCTTC AAACAAAGGA TGGTGAAATT CTCCGGACCT ACAGTCTTTC GGGCTCGCCG AGTTTATCGT CAAATACTTA TCGTATTTCC GTAAAGCGGG AGCCCTTAGG TAAGGCTTCT AATCATCTAC ACGATTACGT GCAGGTCGGT GATTTAGTTC AAGTGTCTCG GCCGGCCGGT GACTTTACAT GGAGAGCCTC TGAGCTTCCT GTCGCTGGAG AAGTAGGGGA AAACTCTGGT GCAAAAACAC GAACACTGGT ATTACTGAGC TCGGGAGTCG GTATTACGCC CATTCTTTCC ATGCTATACC AGTACGTAGC ACAAAGCAAA GACTTACAAG CTCCCCGTCC TGCCTTGTGG TTGCACGGTG CGCGTGATGG AGCACACCAT CCCTTTCGAG AGGAAGTTTC AAAGTTGGTG CAACACGCAC AGCTACGGGC ACACTTACCG CTGCAAACGC ATGTCGTCTA TTCACGACCA TCACCCAAAG ACGCAGGCCT CTACGATTCC ATCGGGCGCA TTCGATTTGC TTTGTTGCAA AACATTGTTG TTGAGTGGAA AGACGCAGAG TACTTTATGT GCGGCTCGAG CTCAATGATG ACCGACATGG AGGAAAGCTT GCTAAAGGCC GGAGTCCGTG CGAGTGACAT TCATTTTGAA ACCTTCTGAA TTCTTTTACT CACTGCGGTA GCTTGAAATT ACAGCGCAAC AAATTAACAA GTGCCATTAT CTTAATT
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Protein sequence | MTITPHHPPQ SNASTIPVAT SADAIGLRES LDEYPSDWSR HNPFHDGEIQ LQKLAGTHRS VMSFAPKFIR PFLPEQHQEF YRAQSFLVAA SRDADGNMWS TLLVASEGPN QSRCPGDFAN LVDSPDPVTL HIRTQPVQGD ALFGQIQVDS DLGLLGIEFA SKRRNRVNGR ILYSTPNDGM VLRVDQSFGN CPQYIKPRKE WWWNAEKKET EGASPTFSSS TKPSHLSELH IKTIQGATTI FLATGYRGQG KDTRFGNDAS HRGGPPGFLL VRDKHTIVLP DFAGNNFFNS LGNLVMDSRM GLTIPDFESG GMLQLSGRAQ IYPGALRLTM FLIEQVNVVP AGTFAIRWSI PSKGESRLLE VVSIVQESVD VKSFHLAAPA TVSPNDDDKT SNHKLWGFKA GQHLPIELQT KDGEILRTYS LSGSPSLSSN TYRISVKREP LGKASNHLHD YVQVGDLVQV SRPAGDFTWR ASELPVAGEV GENSGAKTRT LVLLSSGVGI TPILSMLYQY VAQSKDLQAP RPALWLHGAR DGAHHPFREE VSKLVQHAQL RAHLPLQTHV VYSRPSPKDA GLYDSIGRIR FALLQNIVVE WKDAEYFMCG SSSMMTDMEE SLLKAGVRAS DIHFETF
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