Gene PHATRDRAFT_43312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43312 
Symbol 
ID7197376 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp89697 
End bp91943 
Gene Length2247 bp 
Protein Length627 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177861 
Protein GI219112219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTATTCCAAT ATGGATAGCT CAACGACCTA CTGTGATCTG AAAAACGAAA TCCCACGTCA 
AACTCTTGAC GCCGCCCGAG CAGGATAGAT CGTTTCCGAA AAAGGTATCC TTATGTCCTC
ACGCGGTGTC GTCACTCGTT CAATCTGCGT TACACGGAGC GGAGCGTTAG CCAAAAATGT
TCCCTGGAAC AACTAGATCC TATTGCTCGA AGTGTCCAGT GGGAGACCCA CATAAAATGT
TTCGCTGTTC TAACAATATT GATTCATGAC AATCACGCCG CATCACCCAC CCCAATCGAA
CGCATCCACC ATACCGGTTG CTACATCAGC CGATGCAATT GGATTAAGGG AATCGCTTGA
TGAATATCCT AGCGACTGGT CACGGCACAA TCCATTTCAT GACGGCGAGA TTCAGTTGCA
AAAGCTAGCC GGAACGCACC GTAGCGTTAT GTCGTTTGCG CCCAAGTTTA TCCGTCCTTT
CCTTCCGGAG CAGCATCAAG AGTTTTATCG GGCGCAATCA TTCCTCGTCG CAGCTTCCCG
AGATGCCGAT GGTAACATGT GGTCCACGTT GCTCGTCGCA AGCGAGGGGC CGAACCAGAG
TCGCTGTCCA GGAGATTTTG CAAACCTCGT CGATTCGCCC GATCCGGTGA CCTTGCACAT
TCGAACACAA CCCGTCCAGG GGGACGCCCT TTTCGGACAA ATTCAAGTCG ATTCCGACCT
AGGATTATTA GGAATTGAAT TTGCCTCCAA ACGTCGCAAT CGGGTAAACG GACGAATCCT
TTATTCGACA CCAAACGACG GCATGGTGTT GAGAGTTGAT CAATCTTTCG GCAATTGTCC
CCAGTACATC AAACCAAGAA AGGAATGGTG GTGGAATGCT GAAAAGAAAG AAACGGAAGG
AGCAAGCCCC ACCTTTTCCT CGTCAACCAA ACCTTCGCAT TTATCGGAAT TGCATATAAA
AACAATCCAA GGCGCCACCA CTATCTTCTT GGCAACGGGA TATCGTGGCC AGGGAAAGGA
TACTCGCTTT GGGAATGACG CATCCCATCG TGGAGGCCCC CCTGGCTTTC TTCTTGTGCG
AGACAAGCAC ACAATAGTGC TACCCGATTT CGCCGGTAAC AATTTTTTCA ATTCGCTCGG
CAATCTGGTC ATGGATTCAA GGATGGGTCT GACCATCCCA GATTTTGAAA GTGGTGGCAT
GCTGCAATTG TCTGGACGCG CGCAGGTCGA AATGGATACC CACAAGGCTG CTTAGATTTA
CCCCGGGGCG TTGCGGTTGA CCATGTTTTT AATTGAACAG GTCAACGTGG TGCCCGCGGG
GACCTTTGCT ATTCGATGGT CGATTCCGTC AAAAGGAGAA TCGCGACTTT TGGAAGTTGT
GTCCATTGTT CAAGAATCGG TCGACGTGAA ATCCTTCCAT CTGGCAGCCC CGGCTACTGT
CTCTCCGAAT GACGATGACA AAACAAGCAA TCACAAGCTT TGGGGTTTCA AAGCTGGACA
GCATTTGCCG ATTGAGCTTC AAACAAAGGA TGGTGAAATT CTCCGGACCT ACAGTCTTTC
GGGCTCGCCG AGTTTATCGT CAAATACTTA TCGTATTTCC GTAAAGCGGG AGCCCTTAGG
TAAGGCTTCT AATCATCTAC ACGATTACGT GCAGGTCGGT GATTTAGTTC AAGTGTCTCG
GCCGGCCGGT GACTTTACAT GGAGAGCCTC TGAGCTTCCT GTCGCTGGAG AAGTAGGGGA
AAACTCTGGT GCAAAAACAC GAACACTGGT ATTACTGAGC TCGGGAGTCG GTATTACGCC
CATTCTTTCC ATGCTATACC AGTACGTAGC ACAAAGCAAA GACTTACAAG CTCCCCGTCC
TGCCTTGTGG TTGCACGGTG CGCGTGATGG AGCACACCAT CCCTTTCGAG AGGAAGTTTC
AAAGTTGGTG CAACACGCAC AGCTACGGGC ACACTTACCG CTGCAAACGC ATGTCGTCTA
TTCACGACCA TCACCCAAAG ACGCAGGCCT CTACGATTCC ATCGGGCGCA TTCGATTTGC
TTTGTTGCAA AACATTGTTG TTGAGTGGAA AGACGCAGAG TACTTTATGT GCGGCTCGAG
CTCAATGATG ACCGACATGG AGGAAAGCTT GCTAAAGGCC GGAGTCCGTG CGAGTGACAT
TCATTTTGAA ACCTTCTGAA TTCTTTTACT CACTGCGGTA GCTTGAAATT ACAGCGCAAC
AAATTAACAA GTGCCATTAT CTTAATT
 
Protein sequence
MTITPHHPPQ SNASTIPVAT SADAIGLRES LDEYPSDWSR HNPFHDGEIQ LQKLAGTHRS 
VMSFAPKFIR PFLPEQHQEF YRAQSFLVAA SRDADGNMWS TLLVASEGPN QSRCPGDFAN
LVDSPDPVTL HIRTQPVQGD ALFGQIQVDS DLGLLGIEFA SKRRNRVNGR ILYSTPNDGM
VLRVDQSFGN CPQYIKPRKE WWWNAEKKET EGASPTFSSS TKPSHLSELH IKTIQGATTI
FLATGYRGQG KDTRFGNDAS HRGGPPGFLL VRDKHTIVLP DFAGNNFFNS LGNLVMDSRM
GLTIPDFESG GMLQLSGRAQ IYPGALRLTM FLIEQVNVVP AGTFAIRWSI PSKGESRLLE
VVSIVQESVD VKSFHLAAPA TVSPNDDDKT SNHKLWGFKA GQHLPIELQT KDGEILRTYS
LSGSPSLSSN TYRISVKREP LGKASNHLHD YVQVGDLVQV SRPAGDFTWR ASELPVAGEV
GENSGAKTRT LVLLSSGVGI TPILSMLYQY VAQSKDLQAP RPALWLHGAR DGAHHPFREE
VSKLVQHAQL RAHLPLQTHV VYSRPSPKDA GLYDSIGRIR FALLQNIVVE WKDAEYFMCG
SSSMMTDMEE SLLKAGVRAS DIHFETF