Gene PHATRDRAFT_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3621 
Symbol 
ID7197493 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1020720 
End bp1021610 
Gene Length891 bp 
Protein Length259 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177739 
Protein GI219111975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0123759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACTCCATCAA TAGCTTCCCT TCATGGTTCG TTGACAGGTA TGCTACAGTG GCTCTTGGAC 
TTCCCGCCAT CAAATCGCTC ACAAGCAAGA TTTGGAAACC CTATGTTTCG GATGTGGCAC
AAAAGACTTG TCGAGCGTAG TGTCAATGTG GTTTATACTA TTCTTAGAGT GCAAAAGGAA
TACCCAGGTA GGGGAAACTT TAACAAAGAG GTGTTACAAT CTGCTTCGAA ACGCGGTCTC
GCCGCTATTG ATCAAGTAAA GGAGATTGAA AGCATTACCG AACAGAATGA TCGGGACATC
GTGATTGAGT TGATTGCCTA TTTCCAAGCC GCCTTTGGTC ACGAGGTTCG TCTAGATTAT
GGCACTGGTC ACGAATGCTC CTTTCAAGTC TTTTTGTTTG TGCTTTGCAA ATTAGGATGT
TTCGGTTCGA CCACTGATGT GCCACCTTCC GCTGAACACC TCAAAGCGAC AACAATATCG
ATATGGAGTG CTTACCTTTC GTTGACTAGA CAAGTACAAA CCGATTATAT GCTCGAACCC
GCAGGATCTC ATGGTGTTTG GGGTCTAGAC GACTATCACT GTCTTCCCTT CTACTTTGGC
GCGTGTCAGA TGCAAAGCGA TGGTCTCGAC TATAGGCCTG ACAGTATCCA TGACAATTCT
TTGTTGGAGA GAGAACGCAA CTCGCTTTTG TATTTTGGTT GCATTCGTTA CATCAAATCT
CTCAAAAAGG GCGCACCTTT TTACGAGCAT TCACCGATGC TAAACGATAT CAGCAACCTG
CTGAGTTGGG CGAAGGTGGC ATCGGGTCTT TTACGGCTGT TCGAAGGCGA GGTTCTGGAC
AAAAGGCAAG TTGTTCAGCA CTTTGTCTTC AAGAACCTAT TCACAGCGGA C
 
Protein sequence
TPSIASLHGS LTGMLQWLLD FPPSNRSQAR FGNPMFRMWH KRLVERSVNV IESITEQNDR 
DIVIELIAYF QAAFGHEVRL DYGTGHECSF QVFLFVLCKL GCFGSTTDVP PSAEHLKATT
ISIWSAYLSL TRQVQTDYML EPAGSHGVWG LDDYHCLPFY FGACQMQSDG LDYRPDSIHD
NSLLERERNS LLYFGCIRYI KSLKKGAPFY EHSPMLNDIS NLLSWAKVAS GLLRLFEGEV
LDKRQVVQHF VFKNLFTAD