Gene PHATRDRAFT_33046 details

Gene Information

• Locus tag: PHATRDRAFT_33046
• ID: 7197274
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 1397495
• End bp: 1399589
• Gene Length: 2095 bp
• Protein Length: 670 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177821
• Protein GI: 219112139

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.531262
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCGA GCAACTTGTC GCAGCGCAGT CTCGACTGCC CTTGTCGGAA TTTCTCGAGC 
TTGGAACGTA TTTCTCAAGT GCTCGCATCG AAAAGCCAAA CACAAACTCT GATCGATTGG 
TTGGCAGGGA AAAGCGACGA ATCTTCTTTT GAAGAACGAC GACCTTTATC TTGCAGCGAA 
AAATATCGCT GCAAGTTTCG CGCAAATACT TCGCTATTCA TATTGAACGG AGTCCGCGAT 
GCTTGTCGGC CGTTTTTGGA GTCCGTTTTG GTCTCAAACG AAGGTCCTGC GAACCCGCGA 
CCCTCTCCAA TCGTGCCGTA CGAAGATGCC TTTCCAACTT TACTTTCTAC CCCTCCTCCA 
AATCTGCCTT TTTCTTCCAA AAGCCTTCCA ACACACTCTT TCCAATATGC TCGTTCAGCC 
ACTGACAAAG CTGAGAAATC AAAACCAAAG CGGCGTGTTC GACCTTTGAC AATTTCAACG 
TCCGGACCAT CGGCTTGGGG CGAAGGAAAT TTGGTGACTG CGTCACTGCC AGTCAGCACG 
ACTTTGCAAC AGTGTGATGT ATGCCATCCA AAACTACCGT TAGAAATGCC AATCCCTCAA 
GGTAAATCAA TACCGAAGTC AGCGCGGTCT GGCGCCACGC GGAAAACACC GACAAAGCAA 
GAGAAAAGCG CCCACCAACG GATGGAACAA ACCAGCATGA CTGAGGTGCA AAGGCTAATA 
GAAGTATACT GTGAGCTGGT GAAGAGTGCA CTCGTCCCCT CGACGGCGTT GGAGTTGCAT 
TTGCTGTGTC GTATGTTGTC TGTTCCGATC AGCGATCTAT CGAATCCTCA GAGCTTGCAG 
GATTCCAGTT TTTCCTGTGT TTTCTCCTCA GCGACACAAT GTACATATTT TGCGAGGGAA 
TGTTTGCTTC GCTTGTCTGG TATCCTCCGT GGCTACGGTA AATCCTTTCT GATAGAACTT 
GTTCGATGCG CTCCATTCCG TGTTCACCTT CCCGATATGG TTTCGGACTT TGAAGCACTC 
ATACGGCTCG ACGCGACGCG TGTAGATGCG TCTCTCGACT TTTCACCAAA CAGCCAAATC 
CCTTTGTTGA CCCTTCCTTT CAATGAGGAA AGAGACTCGC GACACAACTA CAAGACTCGT 
GAGGAACAAG CCCTTTACAA GAACCGAGAG GAAAGCCGCG ACGCATTTCT CTACCAGTTT 
AGATCCTTTT TAAATGTGAG AGGGAAATTA GTTGATACAG GAGCCGCGGA AAAAGAAATT 
AAGAAAATCG AACGGTCTTC TCGAACTGTC GTAAACGGAG TGATGGGCGA CAACGTTCCT 
TGGTTTGCGG ATTTTTTTTG CGATTTATTG TTACAGACTG GTCTAGTACC TCTGCAAGAG 
ACAGATACAG ACCTTCTTCG TATCGCCGGT AAGGAAAAGC TCCAAAAACT GCACAAGCGC 
TTTGGATCCA TGGTTCCTCT TACTGAAAAA AGTACCAAGA AACTCGTTGC CGAGCGGCAC 
TTTAGAGAAT CTATCCCGGC GGTGGCAGCA CAGCAGTTCT TTCCTGGCCA TCAGGAGTTT 
TTCTTCCTTT TTCTTATGTC CGCCGACTCC TTCATCTTTG GTTTGCATTT ACGCCGAGTA 
TTGGCCCAGA ATATTAAGAA ACTCGCTGCC GCTACAACGG TAAGGGATTT TGAAAGGCAG 
ATATTGAAAA TGCAATTGCT AGGTCGTTTT GTTGGTGTAC TCTTCTTCGC TCCGAATTGG 
GTTTCATCGA CCACAAAGCA ACAATCTCCG TCTGTACTTT TATCAACTGC TCTGTGCGAA 
ATCTCAATTG CTGGTTTACC AATGCTAGAA ATGCTCGGTG AAGCGTGCCA AAATGGTAAC 
CTCGTGAGTT TCGTTCCATG GGTGGTTGAA GTTCTTAAGA TGTCCATCTG GGACAGAGGG 
GCGCGCAACA GTTTTGAGGT GCGTCAGCTT CTAGCGTATT TGCGGCAGAT ACAATTATTG 
TATTGCAGAA GGGATGAGAG AACTGAAACA ACCAATTCAG TACGCGAGCT CATTTTTGGT 
AGCATCGAGG CTATGCTTGA TGAAGTTCTT GGTCTTGGAC GGACCACGAG TCTAG 

 

Protein sequence

MKSSNLSQRS LDCPCRNFSS LERISQVLAS KSQTQTLIDW LAGKSDESSF EERRPLSCSE 
KYRCKFRANT SLFILNGVRD ACRPFLESVL VSNEGPANPR PSPIVPYEDA FPTLLSTPPP 
NLPFSSKSLP THSFQYARSA TDKAEKSKPK RRVRPLTIST SGPSAWGEGN LVTASLPVST 
TLQQCDVCHP KLPLEMPIPQ GKSIPKSARS GATRKTPTKQ EKSAHQRMEQ TSMTEVQRLI 
EVYCELVKSA LVPSTALELH LLCRMLSVPI SDLSNPQSLQ DSSFSCVFSS ATQCTYFARE 
CLLRLSGILR GYGKSFLIEL VRCAPFRVHL PDMVSDFEAL IRLDATRVDA SLDFSPNSQI 
PLLTLPFNEE RDSRHNYKTR EEQALYKNRE ESRDAFLYQF RSFLNVRGKL VDTGAAEKEI 
KKIERSSRTV VNGVMGDNVP WFADFFCDLL LQTGLVPLQE TDTDLLRIAG KEKLQKLHKR 
FGSMVPLTEK STKKLVAERH FRESIPAVAA QQFFPGHQEF FFLFLMSADS FIFGLHLRRV 
LAQNIKKLAA ATTVRDFERQ ILKMQLLGRF VGVLFFAPNW VSSTTKQQSP SVLLSTALCE 
ISIAGLPMLE MLGEACQNGN LVSFVPWVVE VLKMSIWDRG ARNSFEYASS FLVASRLCLM 
KFLVLDGPRV