| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_32929 |
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| Symbol | |
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| ID | 7197513 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 1130105 |
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| End bp | 1132989 |
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| Gene Length | 2885 bp |
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| Protein Length | 794 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177759 |
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| Protein GI | 219112015 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.508293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAGA ACTCCACCGG CGTCGCTTCC GCCCCGCTGG AAGAAGAAGG AAATATTCCT
CCTCTAGTAG CGGCCCATGT GCCCTCCTAC GGAACAGGCG ACGAATCAGA ACCAGATCCT
GTTCGAGTGA TGATCGACGA AGACGTTGCC TCGGAAGAAG TACCTCTCGT TGTCACTCAT
GACGATGATA AAGATGCGAT TCCCCAGTTC CGGGATGTAC CGTTCGCCGT CCTGTTTCTC
ATTCACGCCA CATTGATGGT ATGGCTGGGA ATCTTTGTTG CACCCAAAGG ATACTCCAAA
ATCAATATTG ATTTTGACAT GATCGAAAAG GAAATGCGCA AAGGAGACGA TATGAGTGAG
CAAGATATTG CGGATTTTGA GAGGTTTGTT GCGTTTGTGG GCAAGTACGC ACAAGTCTAC
CCGAAACGCA TTCTCCTATC CTTTGTTTTT CCGACAGCCC TCTTGGCATT TGTGATTGCT
CTTTTCACAA CCATCTACGT GGTTAAACCT TGTCCCAAAA CGCTAACCTA CGCAAGTTTG
GTTGGATCCT TTGCCTTTAC GGCCATTGTC ATGATTTCAT CGTCCGTTCT GAATAATAGC
CTGTTTGGTG CTGTGATGAC CATTGTCGCT CTCGGTGCGG TTGCATACTA CGTATGTGCT
GCCTGGCGTA TGGTTCCGTT CGCGGCGGTC AATCTGAAAG TGGCTTTGAT AGGCATGAGC
CGCAACTGCG GAGTGTATCT CGTTGCCTTC TTCGCATCGG AGCTCGGATT TCTGTGGCCC
ATCTACTGGG TCTACGTACT GATTGGCGTA TCGGTCGACC GCAATGATAA GTGTGAAAAG
GCACACCCGG GGGCAAATTT TGATATGAGC TCGAATGATT TTGACGATGT GTGCCATCCT
CCACCGTTGG TGTTTCTCCT GTTCTTGCTT TCGCTCTATT GGACAAGCAC CGTCCTTTTG
GTAAGGCGTC CCAGCTTAAA TTTCTGACTT TGTGTATTTC AATTTTGATC CCTCACAGTA
ATTCTCTGTC TCTGAAGAAC ACGGTACAAG TATCGGTTGC AGGTGTTATG GCAACATGGT
GCTTCGACAA GCGCGACGCT GATCATTGTT GTTCCCCAGC AGTATTTGGT TCAGTGTACC
GTAGCATGAC CTATTCCTTT GGTTCAATAT GTCTTGGGTC TTTGCTACAA GCTCTCATTT
CTGTATTTCG GTACATAGTG GAAAGTGCCC GAAGCCAGAG GGAGCGAAAT GACGGTGGGG
GTGCTTGTGG CAACATTCTG CTCTGCATTC TGGAATGCTT CGCCAAGCTA CTCGAAGATG
TCATCGATTA CTTCAATCAA TGGGCGTATG TATTTGTTGG AATCTATGGC TATTCGTATC
TCGAAAGTGG CCGACGAGTG ATTGAGCTGT TTCGAGCACG AGGCTGGACG GCGATAATCA
ACGACAATTT GGTGGGATAT GTATTGGGCT TCACAACCGT TCTGATCGGT GTTCTGACCG
GTGCCACCGC TTTGCTGCTC GAATTTACTG TTTCTCGGAG CAAGCTTGAA GCGAATTCTG
AGTACGAGTC TTACATTTTC GGTCCTATTC CAGGGTGGAG GTGGTGGGCT TTCGGGTACG
TTTGGCTTGT ACATTCTCGT AAGCCTTTAG ATTGCTATGT ATGTCTCGCA CTGACAGGTT
GCTCGCTTTG TTGTAGCATT GGATTTTTTG TGGGAATATG GGTTTCAAGC GTTGTGATGA
ATGTTGTCAA GGCAGCAGTG AACACTTTGG TTGTGTGCTG GGCTGACTCA CCGGCAGTAG
TGGAAATGAA CCACCCTCGA TTGACATCAG AGATGGCAGA TTCGTGGTTG CAAGTTTTCC
CAGAAGCGAA TACCCAGATT CGACCTGCAT ACAATGCCAT TGTTGTCTGA AATCGTTATT
TTCGAAGGGA TGTAGGTAGT AGCCGTGACT GTTTTGTATT TGATTTTCCG TACTAATGTC
CATAGCTACG GTATCGCAAG GTCTGTACGG CGAGCGATTT TAATGTTTAC GACACGTGGA
ATTTGTCACA GTCAAAATGC GCTCCTACTA ACCGTAAGGG CAACTGAAAG ATGAGAAATC
TTCCATCTGC TACGATGCGG ATTTGGATGA TCCTGTCTCC AATCGACATC GCCTTGTGAT
CAAGACTACG GAAAGCAGCA AAGCTACGAC TTTGTTCTCT ACTTTTCACG CTACTCTACA
CAGAATGGCT AACGCCTGTA TATCTGGTCG GAACACGAGG AGGTATCAGA TCTCGTGCCG
GCGATTCATT CAATTGTTAT TTTTGTTGGC GGCGGCTGTT TCCGCAATTT CGGGACATCG
GCAAACCTTC GTCCGCGTTC ACAACCAACC GCAGATATCA TCAGCATTAT CATGGAATAT
AGAAGCAGGA TCATACGACG AAAAAATCGC CCTTAGAATA GCTTCCTTTC CGAGAGGCGG
CTCAGATACT GATGTCGAAG GAGGCGAAAG CGATGAGTAC GACGAGGATA GAGAAGTAGA
AGAAGACGAG TACGACGATG AAAGTGACGA AGGGGATGAT GACGAAAAAG TTGTACCAAT
TGAAATAAGC ATTGAAAAAT ACGATGAGCC ACTGGTCGCA TCGCCAATGA TAAATCTATA
CGCCTCGTTC GGTGTGATGA TGCTAGCACG AAGAATCGAC CTTTTCAACC CAATCGTCGT
TCGTGTCGCA CGGTACGTAC ATAAATCTCC CACTGGACCA TATCATTTGA CTTTGTACCT
TAATATGCTT TCATTTGACT CTCTCAGTGC CATGTTTATC GCTTATCTTG TTCTACACCA
GCTGTTCGTG CTCTATGTTC GTATTCAGGC AAAATCTGCC GATGATAGGA CTCCAATCAC
TCTAA
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| Protein sequence | MYKNSTGVAS APLEEEGNIP PLVAAHVPSY GTGDESEPDP VRVMIDEDVA SEEVPLVVTH
DDDKDAIPQF RDVPFAVLFL IHATLMVWLG IFVAPKGYSK INIDFDMIEK EMRKGDDMSE
QDIADFERFV AFVGKYAQVY PKRILLSFVF PTALLAFVIA LFTTIYVVKP CPKTLTYASL
VGSFAFTAIV MISSSVLNNS LFGAVMTIVA LGAVAYYVCA AWRMVPFAAV NLKVALIGMS
RNCGVYLVAF FASELGFLWP IYWVYVLIGV SVDRNDKCEK AHPGANFDMS SNDFDDVCHP
PPLVFLLFLL SLYWTSTVLL NTVQVSVAGV MATWCFDKRD ADHCCSPAVF GSVYRSMTYS
FGSICLGSLL QALISVFRYI VESARSQRER NDGGGACGNI LLCILECFAK LLEDVIDYFN
QWAYVFVGIY GYSYLESGRR VIELFRARGW TAIINDNLVG YVLGFTTVLI GVLTGATALL
LEFTVSRSKL EANSEYESYI FGPIPGWRWW AFGIGFFVGI WVSSVVMNVV KAAVNTLVVC
WADSPAVVEM NHPRLTSEMA DSWLQLRYRK VWQLKDEKSS ICYDADLDDP VSNRHRLVIK
TTESSKATTL FSTFHATLHR MANACISGRN TRRYQISCRR FIQLLFLLAA AVSAISGHRQ
TFVRVHNQPQ ISSALSWNIE AGSYDEKIAL RIASFPRGGS DTDVEGGESD EYDEDREVEE
DEYDDESDEG DDDEKVVPIE ISIEKYDEPL VASPMINLYA SFGVMMLARR IDLFNPIVVR
VARQNLPMIG LQSL
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