Gene PHATRDRAFT_32923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32923 
Symbol 
ID7197510 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1117868 
End bp1119153 
Gene Length1286 bp 
Protein Length313 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177756 
Protein GI219112009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAG AACAATTCGT CCCACTCAAT GATTTGCGGA AATTCAAGCG TACGGCGTCG 
GCCAGTTCCA ATGAAATTGA GCTCGAAGCC GACGGCATGG AAGACACATT GGAATACCGT
CTACAAGCTG TGGACGCTTC GGGTTCCAAG AAGATCTCTC TTTGGCACGA TGTCAGCCTC
ATTCATCTCG ACCAGGAGAC AAGAGAAGAG ACACAGTACC TCAATTTTGT CTGCGAAATT
CCCAAGTTCA CACGGTATGT TGGATGATTG GCATCGCCTG CTAAACACAA TGACGACCTT
CCACTGTACT TGAACTCACC GTACGCCTCC TCGCCGTCTC TAGTAAAAAG TATGAAATCG
CCACGGATGA ACCTGGCAAT CCCATTAAAC AAGATGAAAA GAAAGGGACT CTTCGCGAGG
TAGGTTTCTA TTGCTCTCTA TCGGATTCGC TAGCGCGTGT CCACAGATTC GCATACGAGG
ATCACTAATT ATGTTGTATG TTGACATCGA CCCATACTAA CCACCAATTT CACATGGTTA
TGTATTTCTT GTACCGGACA GTTCAAAAAG GGCGACATCT TTTTCAACTA TGGGTGCTTC
CCCCAAACCT GGGAAGACCC AACGTTTATT CACCCAGATG CGGAAGGTTG CCGAGGTGAC
AACGACCCGT TGGACGTATG CGAAATCGGC GCCCGCATCG TCCGTCCCGG CGTAAGTTTA
TGGAACACAC TTTACTGCAT GAATTCATTC ACCGAGTGAC GAATTATATG TTTGTGCCTG
TGCCTATATC TCACGCATAT GTGCTCTGAA CTTTGCATGT GCAGGGTGTC CGTCCGGTCA
AGGTGCTGGG CGTCTTGTGC ATGATCGACG AAGGGGAATG CGATTGGAAG GTTGTAGTTG
TTGACGCGGA CGACAAATGG GCTCCGTTCC TCAACGACAT CAACGACGTC GAAGAACAGC
TTCCTGGCCT GTTGGACGCA ATTCGAGAAT GGTACCGTAC GTACAAAATT CCCGACGGCA
AACCGCCGAA CGTGTTCGGT TTGGACGAAA AGTTCATGGG CAAGGCCTAC GCTCTGGAGA
TAATTCAAGA ATGCCATCAC TCGTGGGAAG AACTTCTGGC AGGAGAGAAG GAACGCCTTT
TGGAAGATCA CGGAGACGAA GTCAAGGATC TGGTTCGGAA TCTTTCCCGG AACTCGCTCT
TTACGCTTGG TCTTAACTTG GACGAGCATG CGGAAACTCG TACCGAAGAC TTTGGGGAGA
TCGAAAGTGG TGCTCTTTTC TTTTAA
 
Protein sequence
MQEEQFVPLN DLRKFKRTAS ASSNEIELEA DGMEDTLEYR LQAVDASGSK KISLWHDVSL 
IHLDQETREE TQYLNFVCEI PKFTRKKYEI ATDEPGNPIK QDEKKGTLRE FKKGDIFFNY
GCFPQTWEDP TFIHPDAEGC RGDNDPLDVC EIGARIVRPG GVRPVKVLGV LCMIDEGECD
WKVVVVDADD KWAPFLNDIN DVEEQLPGLL DAIREWYRTY KIPDGKPPNV FGLDEKFMGK
AYALEIIQEC HHSWEELLAG EKERLLEDHG DEVKDLVRNL SRNSLFTLGL NLDEHAETRT
EDFGEIESGA LFF