Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32923 |
Symbol | |
ID | 7197510 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 1117868 |
End bp | 1119153 |
Gene Length | 1286 bp |
Protein Length | 313 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177756 |
Protein GI | 219112009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAG AACAATTCGT CCCACTCAAT GATTTGCGGA AATTCAAGCG TACGGCGTCG GCCAGTTCCA ATGAAATTGA GCTCGAAGCC GACGGCATGG AAGACACATT GGAATACCGT CTACAAGCTG TGGACGCTTC GGGTTCCAAG AAGATCTCTC TTTGGCACGA TGTCAGCCTC ATTCATCTCG ACCAGGAGAC AAGAGAAGAG ACACAGTACC TCAATTTTGT CTGCGAAATT CCCAAGTTCA CACGGTATGT TGGATGATTG GCATCGCCTG CTAAACACAA TGACGACCTT CCACTGTACT TGAACTCACC GTACGCCTCC TCGCCGTCTC TAGTAAAAAG TATGAAATCG CCACGGATGA ACCTGGCAAT CCCATTAAAC AAGATGAAAA GAAAGGGACT CTTCGCGAGG TAGGTTTCTA TTGCTCTCTA TCGGATTCGC TAGCGCGTGT CCACAGATTC GCATACGAGG ATCACTAATT ATGTTGTATG TTGACATCGA CCCATACTAA CCACCAATTT CACATGGTTA TGTATTTCTT GTACCGGACA GTTCAAAAAG GGCGACATCT TTTTCAACTA TGGGTGCTTC CCCCAAACCT GGGAAGACCC AACGTTTATT CACCCAGATG CGGAAGGTTG CCGAGGTGAC AACGACCCGT TGGACGTATG CGAAATCGGC GCCCGCATCG TCCGTCCCGG CGTAAGTTTA TGGAACACAC TTTACTGCAT GAATTCATTC ACCGAGTGAC GAATTATATG TTTGTGCCTG TGCCTATATC TCACGCATAT GTGCTCTGAA CTTTGCATGT GCAGGGTGTC CGTCCGGTCA AGGTGCTGGG CGTCTTGTGC ATGATCGACG AAGGGGAATG CGATTGGAAG GTTGTAGTTG TTGACGCGGA CGACAAATGG GCTCCGTTCC TCAACGACAT CAACGACGTC GAAGAACAGC TTCCTGGCCT GTTGGACGCA ATTCGAGAAT GGTACCGTAC GTACAAAATT CCCGACGGCA AACCGCCGAA CGTGTTCGGT TTGGACGAAA AGTTCATGGG CAAGGCCTAC GCTCTGGAGA TAATTCAAGA ATGCCATCAC TCGTGGGAAG AACTTCTGGC AGGAGAGAAG GAACGCCTTT TGGAAGATCA CGGAGACGAA GTCAAGGATC TGGTTCGGAA TCTTTCCCGG AACTCGCTCT TTACGCTTGG TCTTAACTTG GACGAGCATG CGGAAACTCG TACCGAAGAC TTTGGGGAGA TCGAAAGTGG TGCTCTTTTC TTTTAA
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Protein sequence | MQEEQFVPLN DLRKFKRTAS ASSNEIELEA DGMEDTLEYR LQAVDASGSK KISLWHDVSL IHLDQETREE TQYLNFVCEI PKFTRKKYEI ATDEPGNPIK QDEKKGTLRE FKKGDIFFNY GCFPQTWEDP TFIHPDAEGC RGDNDPLDVC EIGARIVRPG GVRPVKVLGV LCMIDEGECD WKVVVVDADD KWAPFLNDIN DVEEQLPGLL DAIREWYRTY KIPDGKPPNV FGLDEKFMGK AYALEIIQEC HHSWEELLAG EKERLLEDHG DEVKDLVRNL SRNSLFTLGL NLDEHAETRT EDFGEIESGA LFF
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