Gene PHATRDRAFT_32848 details

Gene Information

• Locus tag: PHATRDRAFT_32848
• ID: 7197476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 930098
• End bp: 932155
• Gene Length: 2058 bp
• Protein Length: 685 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002178036
• Protein GI: 219112569

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.270203
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCATC TGCTAGCATT GATGGAGGAC GAGCCTCTGG AAGACAACAG CAAAAGTTCC 
CACTCAAAGA TACCAGAACA TATCGTCCGA CAAGCCCGCA ATGTTTCCCT AGAACAAAAG 
ACCACACCCG CGCTAGCAAC TGACATTCAG GATGCCGTGC ATCTTGAACC GCAGCACCAA 
TTGTCTCTGA GTGTGGACGG TCGAGTTGGT ATTCGTATGA TCAAGCGAAA GATCTCGGGG 
TCGCAGTTGT TGGACATTCT AACAGCACAT CCTTACCAAT CACCGGCAAG CTTGGCGGCC 
ATGAGTCTCG AGTATTTGAA TCGTTTGCTG CTAGAGCCGG CCTCAATAAT AGACCAAGCA 
ACTGTTTGCG GGCGTACCAA CGTGATGACG GTCGGCATCG TGTTTTCCAA CTCGGGTACA 
CGAGTTGCCT CTTCGGGAAA TGCTTATTGT GTTGTTACTC TCGGATCACT AAATACGGGT 
CCAGCTGTTT CCGTATTGTT GTTTGGTTCC GCTTACGGTA AGCACTGCCG TAGCTGTATC 
CCTGGTAAAG TGGTGGCCTT GGTCAATCCT CGCTTAATTC CTGCTAAAGG TGCAGCCCAG 
GGAGACACCT CCATTTCGTT TTCTGTCAAC GAGGAACGTC AGCTTTTGGA CGTCGCTGAT 
GCCCGTGACT ACGGAACTTG CAAGGCTGCG GTCCGGGGGA AAAACGATAA CGGTCATTGG 
GTTGCTGGTG GTAAATTTTG CGGTCACTTC GTGGATAAGC GCATCAGTGA GTATTGCAAT 
CCACACCGGA AACAGGCCAA CGTCAAGACG GGCACAGCCA ACCACACCTC CACATCCGCC 
CTCCAAAACC TCCGAAATCA AGCCGTCGCT TTCCCTAGAA TTCAGACTAG AGTGATGATA 
CCACCTGGTG GTGTTAAACC CTTTCAGACA CCAAAGCAAC AAACGAAATT GCGATCCGCC 
CAAATGATGT CTGACTTTCT AGCTCAGTCT ACCGCCCCTG GGGCGGGATG CTTACTTCCT 
TTCCAGCAGC CAACACTATC ACGCAGCCAA CCTGCTATGA ACAAAAATAC TATTTTGAAT 
CCGAAACAGT CAGCTACTAA GTCAGTCGAA ATTCCAGGGA GAGGATTGCT CAATCCGTAC 
GCCAAAGGAG CATCTTCCAC CGCATCGTCG CACGCGAGGG GTGGGTTTTC TCCACCCAAT 
TCCGTACGTA TCCAGGACAC CACCATACGA AAACCGTTTA CAGTCAACCG GGTTAGCCCG 
CCGGCTTCAA CCTCGCACTC GGTCACAGAA GATTGGTTAC AAAAAGCTTC CAAGAAGCGC 
ACTCCACTTG GCAACGCACA TAACCAAAAA CGCCAGCGCA GATTTGTCAA TACCGACACA 
AGAAACTTCA ACGGGTCCGT ACCAGTTCCT AAGCCCTCAC AGATGTTTCA GACTGCACGC 
ATAACCAAGC GAGTACCTAT GATACAGACG AGCGATGTCA AGGAAAAGGC AAGGGCGGCC 
CAGGTTCTGT CGCAACAACA GATCTTGGCG TGTCGACTGC GGGAACAGGA TGGCGGAGGT 
AGCCAGAGTT CCGTTTTTAA AGCGTCTCGC CCATTATCAG GGGCCGATTG CTCAGCTGTA 
AGACAGCAAG ACCGAAGGGA GGAATTTTAT GCGTTGCTTG ATGACATCGA CATTCAAAAT 
GCTTCCGCCG CTACAAGCCA ATTCGCGGAC GAGGTCAGTG CAGAAGAATA TGCCAGAAGC 
CGGCGCGTCG TTACTGAACT CGAGGAACAA GAAGGAAAGA AACAGAGCAA GGTGGCCAAG 
TCGAAGACCC TCGGTGACAA GGATAAGACA GCTATTCGAA AAGAATGGTA CTGTCAGCAA 
TGCCGAAAAT CGTCCCCGTT CAAACCAGCT GGATGTGTAC GCCGAGGACA CAGCGTTGCC 
ACGAAGCGAG AGATTGTTCA AGCCAAATCT ACATCTGAAC GACGCCTGGA TTTGGCTAGC 
AAGGATGCCA ATGATGGCGG CTTAACTCTA GGCAGTGGTA TTGAATGGTC CGCAAATAGA 
TGGAGTCGCT TCAACTAA 

 

Protein sequence

MDHLLALMED EPLEDNSKSS HSKIPEHIVR QARNVSLEQK TTPALATDIQ DAVHLEPQHQ 
LSLSVDGRVG IRMIKRKISG SQLLDILTAH PYQSPASLAA MSLEYLNRLL LEPASIIDQA 
TVCGRTNVMT VGIVFSNSGT RVASSGNAYC VVTLGSLNTG PAVSVLLFGS AYGKHCRSCI 
PGKVVALVNP RLIPAKGAAQ GDTSISFSVN EERQLLDVAD ARDYGTCKAA VRGKNDNGHW 
VAGGKFCGHF VDKRISEYCN PHRKQANVKT GTANHTSTSA LQNLRNQAVA FPRIQTRVMI 
PPGGVKPFQT PKQQTKLRSA QMMSDFLAQS TAPGAGCLLP FQQPTLSRSQ PAMNKNTILN 
PKQSATKSVE IPGRGLLNPY AKGASSTASS HARGGFSPPN SVRIQDTTIR KPFTVNRVSP 
PASTSHSVTE DWLQKASKKR TPLGNAHNQK RQRRFVNTDT RNFNGSVPVP KPSQMFQTAR 
ITKRVPMIQT SDVKEKARAA QVLSQQQILA CRLREQDGGG SQSSVFKASR PLSGADCSAV 
RQQDRREEFY ALLDDIDIQN ASAATSQFAD EVSAEEYARS RRVVTELEEQ EGKKQSKVAK 
SKTLGDKDKT AIRKEWYCQQ CRKSSPFKPA GCVRRGHSVA TKREIVQAKS TSERRLDLAS 
KDANDGGLTL GSGIEWSANR WSRFN