Gene PHATRDRAFT_32833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32833 
Symbol 
ID7197468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp904306 
End bp905436 
Gene Length1131 bp 
Protein Length376 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177714 
Protein GI219111925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.742524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTT CTCAGTATGT GACCTTGATA AGCTTTAGCC CACATGTTCG GTATCTTTGC 
CTACTGTCAC TTTCATGGTT GTCTGTCACC AGCCATGGCT TCGCTCTCTC CCACAACACT
CTTAAACGGT TTGCACCGAA CAAAGCATTG TGTAGCCCCC CTACACGCCT TGACCTGATA
TCTTTGGTCA ATTTTCGTGA TGAAATCACC TTTTTTGATA AAACCGACGA CGAGCGCTGT
TGTATAAACC GCCAAGGAGA GTTTCGACCC CAAAAAGGTG ATGTCTTTGA ACTTGCCCTG
GCTGAAGAAA CGGACCTTCC TGATGTTTCC CGCTTCATTG TCACTAGTTT TGGCGCCGAC
GCAATTCGGG TCAGTCAGGA TATGAGCACA TTCGAAGGAA TGCTCATGCG TCCTGCTGTT
GAACTCGTCA ATGGCTATTC CGGTATTGTC GCCTTCGCCG AAGTTTTAGC AGGCCTACGG
AGTAGACTAA AAACAAGGAT AGCCAACGGC TCCGACCTTT CATTGCCTGA ACTCAAGGGA
CGTTCCCGCA CAGAGCAAAT ATCTGAGGCC ACCAACGACT CTATTGTGTT AGTACTTGGA
AGACGGCACG CGGGAAATGA TTGGCACATA GACGTGATTG CTTCGGTCGA GCTAAGATTG
CAACTTTGTG ATGCCAAGAT CCCTTTCTCC CTCCCATGGC TGGACCGGAT TGAACGTACT
GCCGCCTCAT GGATAGGTCT CGGCAAGAAT CATGCTCGGG ATTTGCAGCC TTACTTAGGA
AATCTGTGCG TGGCCGAAAG ATACCGTGGA AGAGGTATAG GCCGAGCGTT GGTACGGTGT
GTCGAAGATA TTTCAAAGAC AAAATGGGGC TATAGCCGAA TATATTTACA CGTCGACAAG
GACAACGCAG CGGCGTTAAA TTTGTACCAA GAGGAGGGTT ATAGAGATGT GGGCCTTCGT
TGGAAACCAT TCTGGGCGGG CAAAGCTGTG GACATCGGAT ATTATGTGAA AGGTTTGAAT
AGGAAAGAGA GAAAGGAATA CAAGGCTTCG CTTTCTATAG ATAAGAAAGA GAACAAGAGC
GACGCAAATA CTGTGGAAGG AAAATTGAAA AGGAGCGACA TAACTAGGTA A
 
Protein sequence
MTASQYVTLI SFSPHVRYLC LLSLSWLSVT SHGFALSHNT LKRFAPNKAL CSPPTRLDLI 
SLVNFRDEIT FFDKTDDERC CINRQGEFRP QKGDVFELAL AEETDLPDVS RFIVTSFGAD
AIRVSQDMST FEGMLMRPAV ELVNGYSGIV AFAEVLAGLR SRLKTRIANG SDLSLPELKG
RSRTEQISEA TNDSIVLVLG RRHAGNDWHI DVIASVELRL QLCDAKIPFS LPWLDRIERT
AASWIGLGKN HARDLQPYLG NLCVAERYRG RGIGRALVRC VEDISKTKWG YSRIYLHVDK
DNAAALNLYQ EEGYRDVGLR WKPFWAGKAV DIGYYVKGLN RKERKEYKAS LSIDKKENKS
DANTVEGKLK RSDITR