Gene PHATRDRAFT_32830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32830 
Symbol 
ID7197466 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp897041 
End bp898313 
Gene Length1273 bp 
Protein Length393 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177712 
Protein GI219111921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA GCAAGAAAAC TATCACAATC AACTTGACCA GAAATGACAG TAAAATTGCT 
TCGGCGAGAG GAGCAGCATC GAAGCCTTAT TCATTCCATG GCGGTATGAC GACGACTAAT
CTTTTGTTCG CAAAGGCGGG AAAACCTTTA CAAGATCGGG CCGAAACTGT AGCCTTTATG
AAAGTGCTAA TGGGTCAAGA GCAAGCAGTC GATGGCTGCA ACGACGGTAC ATCTTCGGCA
CCACGTCCCC AGCGTCCTCA ACTGTCAAAC GTACATGGCG CCGGGCTTCT GCTGATCTCT
GATATACCAG ATTCATGTAG AAATAAACAG GGCGTCGTTG TAGGAATAGA CGAAGCAGGA
CGAGGCAGCA TCCTCGGACC CATGGTTTAC GGTGCCGCCT TCTGGAACCC GTGCGATGAG
GACCGCATTC CGAACGATTT CAATGATTCC AAACAGCTTT CGGAAGACAA GCGTGCTATG
TTGCTGCACA AAATTATGTA CGACACTCCC GAGATGGGAT TTGCCGTGCG CGTCTTACAC
GCCAGTGAAA TTTCCCGAAA CATGCTTCGC ACCGAATCAT ACAACCTGAA CCAAATGTCA
CACGACGCGG CGGCTGGTAT CATTGAACAT CTTCTGGAAG CGGGAGTTCA AATCGGGGCT
TGTTTCATCG ATACGGTCGG AAATGCGGAT CACTACAAAC GAAGGCTGCA GCAAGAATTT
CCAGGCATTG ACTTTACTGT AGAATCCAAG GCTGACGCCA AATACCCACC TTGTTCCGCT
GGATCTGTCG GTGCGTGTGT TTGTGCGATT AGACCGCGTG TTTTGAAAGG ATTTGCTTAT
TTGCATTCAC ATAATGCTAA CCATTGCATC TCGTGTCGCA GTGGCTAAAA ATGTTCGTGA
TCGCATGATG GAGAGTTTTC AGTATTCGGA GATGAGTCTG AAACGCGACC CGAAATTTGG
CTCTGGCTAT CCCTCAGATC CTGTGTGCAA AGACTGGATG GAAAACAACC AAAATTGTAA
GGTATTTGGA TATCCAGACG TTGTGCGATT CAGTTGGAAC CCGGCGAAAA AAGCGTTAGA
AAGGAACGCG GCTTCGGTCC TATTTCAGGC CGACATAATC GACGAAGACG AGGAAGGAGA
ATACTGTATT GGAAAGAAGC AACAGCAAAC GCAAATGAGT GCATTTTTGG GGAAGCAAGA
CGCGACACGT AAACGAAAGC GATATCCGTT TTTTGAACGT AATCGACTCC AAGTCGTAAA
CAAGCTATTC TAA
 
Protein sequence
MKTSKKTITI NLTRNDSKIA SARGAASKPY SFHGGMTTTN LLFAKAGKPL QDRAETVAFM 
KVLMGQEQAV DGCNDGTSSA PRPQRPQLSN VHGAGLLLIS DIPDSCRNKQ GVVVGIDEAG
RGSILGPMVY GAAFWNPCDE DRIPNDFNDS KQLSEDKRAM LLHKIMYDTP EMGFAVRVLH
ASEISRNMLR TESYNLNQMS HDAAAGIIEH LLEAGVQIGA CFIDTVGNAD HYKRRLQQEF
PGIDFTVESK ADAKYPPCSA GSVVAKNVRD RMMESFQYSE MSLKRDPKFG SGYPSDPVCK
DWMENNQNCK VFGYPDVVRF SWNPAKKALE RNAASVLFQA DIIDEDEEGE YCIGKKQQQT
QMSAFLGKQD ATRKRKRYPF FERNRLQVVN KLF