Gene PHATRDRAFT_32823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32823 
Symbol 
ID7197462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp874661 
End bp875329 
Gene Length669 bp 
Protein Length222 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178025 
Protein GI219112547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.194414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAT CGAGGCCTTT CCCCTGCGAT GAAGTCATTG CGCGCAAGAA AGAATTACGG 
AAAGAAATTC GGTCGAAATT GAAAGCTCTT TCTAAGGAGG AAATTCGCGC TCAAAGTGTT
AGAGTGTGGG ACCGCCTCTT TGAGCTCCCT CAGTATCGGC AAGCTAGATC CATAGGACTC
TTTCTGTCAA TGCCAACAGG CGAGATATCT ACCGAATTAG CGTTAAAGAA TGCATCAGAA
AACGAGAAGC AGGTCTACGT TCCACAGGTT GGCAAGAACT TTGAGCAAGC GGACATGGAA
CTGATAAAAG TTGTCAAGGA TGATGGAATC AAACAAGGCG AATTGTTTTA TCACTCGTGG
CCCCTCAATA AGTGGGGTAT TCCTGAACCT CCTCCGCATA TTCCGCTGAT ACCGGCGGCA
CCAGGCGATA TTGATGTGAT TGTGGTTCCT GGTTTAGCTT TCGACGAGAA GGGGAACAGA
CTCGGTCAAG GGAAAGGGTA CTATGATCGC TTCATTGCGC GTATGACATT AGGGGAAGGA
GTAAGTGCCC CCTTTTTGGT GGCCGTGGGC CTTGAATGTC AGCTCACAGA TCGGGTACCG
GTGGAAGAGT ACGACCAACT GATGGATCTT GTCCTTTTGC CTAGTCAAAC GATCGTCATT
GAAAAGTAA
 
Protein sequence
MSSSRPFPCD EVIARKKELR KEIRSKLKAL SKEEIRAQSV RVWDRLFELP QYRQARSIGL 
FLSMPTGEIS TELALKNASE NEKQVYVPQV GKNFEQADME LIKVVKDDGI KQGELFYHSW
PLNKWGIPEP PPHIPLIPAA PGDIDVIVVP GLAFDEKGNR LGQGKGYYDR FIARMTLGEG
VSAPFLVAVG LECQLTDRVP VEEYDQLMDL VLLPSQTIVI EK