Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32813 |
Symbol | |
ID | 7197310 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 856511 |
End bp | 857400 |
Gene Length | 890 bp |
Protein Length | 266 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177701 |
Protein GI | 219111899 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0694716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATA ACATCAATTT AGAAACATCC GAAGCCAAGC CAGAGTGGAC TATCTTGTAT CACGTACCAG GATTATGCAA AGGTCGCGGA GAGTTCTTGC GTCTCATGCT TGAAGACAAA GGGATATCGT ACGTCGACAC CGACGAGAAT CTTTATGGGC CGGAAGGTCT GACGGATGTT TTCCGAGGAT CCTTGGAGGC AATCGACGCG GACATCGACA ATCCCAAATA CCCTTATCCA ACAATGTTTC CACCTGTAAT ATGGCATCGT CCAACCAATG GTGACCCTCA AGTCCTCATC AATCAGGTTG CGGCTTGCAT GATCTACATT GGTGATGTGC TGGGCTATGC TCCAAGTACG ATTGCCGAGA AAGCAAAGGC AAACGCCATT CTTATGAATG CCATTGATTA CATCACGAAC GGTCGCAGTA GTTTTCATCC TGTAGATAAT CATGCGAGTT ACAAGGACCA GAAAGAGCAA GGTGATCAAG CTTCCTTGGA ATTTTCGCAA GGGCGAATGA AGAAGTACTT GCACCATTTT CACAAAATTG TCGCTCGGAA CGGTGGTTCT CGCAAACCGG TAGCTGGTGG TGAGTTTGTA ACTTACGCCG ACTTTGCTCT GTTTCATGTA TTGGATGCGA CTATTGCCCA GTTCAATACT GACTTTTACG ATATGGCATG GGATACCACA AATGTGCCAG CATTGAAGGA CTATCACGCT TGGATGAAAT CCCGGCCCAT GTTGCAATCG TATTTTTTGT CGGACCGGTG CGCTCGTAAG TAGTTCATTG GGACGGTCGT TTGCCTCTTA TTGCTATTTG ATCACATTGA CCTCAAATTT TCTTTCTGCG TTTTATCTTT ATAGCCTTTG CCGGTGATAG CATGATGTAG
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Protein sequence | MTDNINLETS EAKPEWTILY HVPGLCKGRG EFLRLMLEDK GISYVDTDEN LYGPEGLTDV FRGSLEAIDA DIDNPKYPYP TMFPPVIWHR PTNGDPQVLI NQVAACMIYI GDVLGYAPST IAEKAKANAI LMNAIDYITN GRSSFHPVDN HASYKDQKEQ GDQASLEFSQ GRMKKYLHHF HKIVARNGGS RKPVAGGEFV TYADFALFHV LDATIAQFNT DFYDMAWDTT NVPALKDYHA WMKSRPMLQS YFLSDRCAPF AGDSMM
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