| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_32803 |
|---|
| Symbol | |
|---|
| ID | 7197303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 833009 |
|---|
| End bp | 835411 |
|---|
| Gene Length | 2403 bp |
|---|
| Protein Length | 800 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178015 |
|---|
| Protein GI | 219112527 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.028074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAATAG CGCTCAGAAG AATGATAAAG CTGCGGGCAT CTATACTTGC GGTGTTGTTA
ATATCGTGTT ATGTTTCGGC TTTCCAACCG AATCCGATTC ATTCCAATAG GAGGGCGACG
AGCAGGGGTC CAAGCACGTC CTGTGAAAGG AACATTCCGA CTGGCTTCGG TCGTCCGAGT
CCATCAAGAT TTGACCTTGA CTTTCAGAAA CATCAATCTC AGTATGGAAA GCTGTTTTCT
TTGAATAAAC TCGTTGAAGA TATCAGCAGC AGATCTCCGG GCCAACTACC CTCCACCGTC
TTTGTCGGTG GAAAAGGAGG AGTCGGGAAA ACCACCGTGT CATCGGCGCT GGCCGTTAGT
TTGGCTTCAG CCATCGAAAA GGATTTGAAG GTTCTGATCG TATCTACCGA CCCTGCTCAC
TCTCTAGGTG ATGCCTTGGA TGAGGATTTG CGCAAGAACA ACGGTCGTCC TGTTGCTATG
ACGGACTCTC TGACAGGTGG TAGATTGGAC GCATGCGAAG TCGACGCTTC GGCTGCGCTC
GAGGACTTTC GCGAAAACAT TGCTGCCTTT GATATCGATC GACTAGCTGA TGCTCTCGGT
GTTTCTGTGG ACTTACTGGA AAGCTTCGGT TTGAGAGAAT TCAGTGGTCT TTTGAACAAC
CCTCCGCCAG GTTTGGACGA ACTCGTGGCT TTGTCGAATG TATTGGATTC GGAATCTGTG
GCCAAAGGTT ACGACGTGGT AATTGTGGAC ACCGCACCCA CCGGACATAC TTTGCGACTG
TTAGCTTTGC CGAAATTCTT GGACGGCCTA TTGGGGAAAC TTATTAAAAT TCGCTTGCAA
CTATCGGGGC TGGCGTCCAC TTTACAAACC TTCTTTGGAA ATGACGAAGC ACAGAAACGT
GCAAAAAGCA TCGACGATGC CGTCAACCGA TTGGAGCAGT TTCGTCGAAA GATGAGTAAT
CTTCGCGAGC GGCTTCAAGA TTCCCAGTCG ACGCGTTTTG TTGTCGTGAC AGTCCCTACC
AAGCTCGGAG TTGCCGAATC GAAACGCCTT GCCGCCGAAC TCAATTATCA AGGAGTAAGT
ATCACGGATA TAGTCGTGAA CCAATGTGTC GGTGGGATAG ATGACGATGT GGACTCTGAA
GCTCTACAAC AATATTACGA TCGACGAAAG GATGGACAGA AAAAATGGAT CGCCAAGCTT
GAAGAAGCTG TTCAGGACGT GAGCTGTAGT GAAGAGTACA AAGCAAATGG TAGTTCCGCT
CCTATTGGCA TTACCAGGGT TCCATTTTTC GATGTTGAAT TGGTCGGAGT GCCCGCATTG
GGATACCTTG CTGCACAATG CTTTACAGAA AACCTCAGCT TTGCGCATTT GATGAATGTC
GATAGCTCGA ATGAGCCACG AGTTGTAATT TGTGGGGGGA AAGGAGGAGT CGGAAAGACA
ACGACTTCGT CGGCACTAGC GGTTTCGATG GCTTCGAAAG GCCACAAAGT AGCGCTGATA
AGCACGGATC CGGCTCACAG TATTGGTGAT GCTATCGAAA TAGACCTCTC TGGTGGAAAG
CTTGTGGATG TTCCGCTAAT AGGAATCCCG ACGACGGATG GCTCACTGTC TGTTTTAGAA
ATCGATCCGT CGACAGCAAT CAATCAATTT AAAGGTGTTG TGGATCAACT CATTGGTGGA
GACGATAATC CTTCAGATGC TGGTCTTCGA AATACGCTGC GTGACCTACA AGAGGTGTTT
GATACTCTTC CGGCAGGCAC GGACGAGGTG GTGGCTTTGG CGAAGATTGT CAATCTGGTG
AAGAAGGGCG GATTCGACCG GATTGTATTG GACACGGCCC CAACAGGGCA TACACTTCGA
ATGCTGAGCA CACCAGGCTT TCTTGCCGAG CTTATAGATC GCCTGCTTAT TATAGCCGAA
AAAGTGAATT CGAATACGGC AATAAAAATG TTAATCGGAA GTTCCGCACG GTCAGAGGAC
ATCTCAAATG CTGCAGCAAC AGCAAAGTCC ACTCTTCTGT CCTTCCAGCT CCAAATGTAC
GATCTCGAAA ATTTGTTTGC TGATGCTGCA CAAACGGAAT TTCTCATCGT AACAGTGCCC
ACGGAGCTTG CCGTAAGGGA AAGCATGCGA CTTCTAAATG ATCTGACGTT TGAGTCCCCA
GACATGCCTA TTAAATGCCG AAACATTGTG GCAAACCAAG TTCTTGGGGA CGATGGAAAC
GATGCAAAGA CTTTTCTGGA TCATGTGGGG CAGACTCAAG CAATATCCGT AAAAGACCTT
GAAGATGCTG TTTCGAGTTA CCCTGCACCT CCTCTAATTA CCAAAATTAA GTACCTGGAC
ACGGAACCCC GCGGTGTGTT TGGACTTAAG GTATTGGCCG ACGAACTACT GAGAGAGATA
TAG
|
|---|
| Protein sequence | MVIALRRMIK LRASILAVLL ISCYVSAFQP NPIHSNRRAT SRGPSTSCER NIPTGFGRPS
PSRFDLDFQK HQSQYGKLFS LNKLVEDISS RSPGQLPSTV FVGGKGGVGK TTVSSALAVS
LASAIEKDLK VLIVSTDPAH SLGDALDEDL RKNNGRPVAM TDSLTGGRLD ACEVDASAAL
EDFRENIAAF DIDRLADALG VSVDLLESFG LREFSGLLNN PPPGLDELVA LSNVLDSESV
AKGYDVVIVD TAPTGHTLRL LALPKFLDGL LGKLIKIRLQ LSGLASTLQT FFGNDEAQKR
AKSIDDAVNR LEQFRRKMSN LRERLQDSQS TRFVVVTVPT KLGVAESKRL AAELNYQGVS
ITDIVVNQCV GGIDDDVDSE ALQQYYDRRK DGQKKWIAKL EEAVQDVSCS EEYKANGSSA
PIGITRVPFF DVELVGVPAL GYLAAQCFTE NLSFAHLMNV DSSNEPRVVI CGGKGGVGKT
TTSSALAVSM ASKGHKVALI STDPAHSIGD AIEIDLSGGK LVDVPLIGIP TTDGSLSVLE
IDPSTAINQF KGVVDQLIGG DDNPSDAGLR NTLRDLQEVF DTLPAGTDEV VALAKIVNLV
KKGGFDRIVL DTAPTGHTLR MLSTPGFLAE LIDRLLIIAE KVNSNTAIKM LIGSSARSED
ISNAAATAKS TLLSFQLQMY DLENLFADAA QTEFLIVTVP TELAVRESMR LLNDLTFESP
DMPIKCRNIV ANQVLGDDGN DAKTFLDHVG QTQAISVKDL EDAVSSYPAP PLITKIKYLD
TEPRGVFGLK VLADELLREI
|
|---|
| |