| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_32692 |
|---|
| Symbol | |
|---|
| ID | 7197535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 562936 |
|---|
| End bp | 564411 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177961 |
|---|
| Protein GI | 219112419 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATGG ACGGTGGGTC CTCGTCTCTG TATCCACGCG TGTTTAGTAC ACCGAATCTG
TCCGACGAAT GGTGCGAACG TGATTGGCGT GTAGTGGCGT GCTTGGGTAC GCCTCGCACC
GAACGGAGTC ACAGTGATGC CGAAAACGAA TCACCCCCGC CGGATGGGAA CCGCAACAAC
GGCCCCACCC ACGTAGAGGA CAAAGTCGGC AGTGATGCTC GCCAGCGACG CTTCGACCAC
TTCACCCTGG CGACCGCGAA ATCCTATCAT CCACCCGGAA TGGTTCAGGA TAGAAACATT
GGCGAAATTA TTCTCCCGCC GATACTGCAA GCACACACCA CTGGGCTGTC CCTTGGTGCT
GGCGGCAACC GCAATAACAA TCAGAACAAT ATTTTTTACC CAAAACACGT TCTCCGACGG
TCGTCTCCGC CAGGATCGTG GTCTCCGACG GCCACTACCG CTACCAGCAG TGACACCTTT
CACGTGCTTC CCGCCGCGGT TCCCGAAGAA GCCGCATCGG AATTGGAGTA TAGTACTGCC
CGTCCCGACG AGAATTTACC AACGGAGAAT TCTCTACCGA GTGAACCTTT GGGCGCACGA
AGTCACGAGC AGAGACAACA GGCCGCGCAG CAAGTCGTCA ACGAATTGTT GGGGATGCTC
GTCGTTCCCA ATGTTTGGAG CCACGTTGCA ACTCCCCCTC ACACTGCCGG GCTCCATGCC
CACAAGCCGT CACCGCCACC ACCGGTCACG ACTTCGCCCA TGCGCACTTC CCGGTCTCCA
TCACCACAAC GACGACCCAT TTTTAGTCCC CTGGTACACA AACACGCTAG CGAAAACAGT
TTTGATGTGT CCACCGTCGG AATGGACGAC GAGGAAGATG GTGTCTCGGT GGGAGTGGAG
GGTCACTTTG CCCGTCTCAC CACGAACGAC CGAGCCCTGT CGCTGCCCAC TAAATCATAC
ACGGCGACGG CCAATTTACC CCGCAAACCC TCCTTGAAGC GCGTTTCTTC CATTCCCTGT
TGCAAGCCGC AAAACCAGTT CGGTAGCGTC CCCTCCGATC TGGACGGACC GGATCTGAAA
CGCACCGTCA GTTTCGGCAC ACTCGAAACC CGCGAGTTTT CGATCGAGCT GTCCGATCAC
CCGAGTTGCT CGTACGGGCC TCCGATTCAG TTGGGTTGGG ACTACCACGA TCAGGAAACG
CGCAACGTGG ACGAGTACGA AACATCCCGC GTGCCGCGCC GGCACGTCTC GGATATGATC
CTCTCCTACA ACGTCCGACG GTATCTGTTG TTGAAACGTG CCGGCTACAC GCCGGCGGAA
CTGCGCGACG CCATGCGGCA AGTCGACAAG GTCAAGCGCG AACGTATCCT GACGGACCTC
TTCTGGCCCG TGGCCGGTCT CGACGAAACG TTGGAAGAAG TCGTGCTGCG GATCAAACAA
GTCTTTGGAC ACGGCGAGGA ATCTTTGCAA TTTTAG
|
|---|
| Protein sequence | MPMDGGSSSL YPRVFSTPNL SDEWCERDWR VVACLGTPRT ERSHSDAENE SPPPDGNRNN
GPTHVEDKVG SDARQRRFDH FTLATAKSYH PPGMVQDRNI GEIILPPILQ AHTTGLSLGA
GGNRNNNQNN IFYPKHVLRR SSPPGSWSPT ATTATSSDTF HVLPAAVPEE AASELEYSTA
RPDENLPTEN SLPSEPLGAR SHEQRQQAAQ QVVNELLGML VVPNVWSHVA TPPHTAGLHA
HKPSPPPPVT TSPMRTSRSP SPQRRPIFSP LVHKHASENS FDVSTVGMDD EEDGVSVGVE
GHFARLTTND RALSLPTKSY TATANLPRKP SLKRVSSIPC CKPQNQFGSV PSDLDGPDLK
RTVSFGTLET REFSIELSDH PSCSYGPPIQ LGWDYHDQET RNVDEYETSR VPRRHVSDMI
LSYNVRRYLL LKRAGYTPAE LRDAMRQVDK VKRERILTDL FWPVAGLDET LEEVVLRIKQ
VFGHGEESLQ F
|
|---|
| |