Gene PHATRDRAFT_32539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32539 
Symbol 
ID7197396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp171937 
End bp172845 
Gene Length909 bp 
Protein Length302 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177879 
Protein GI219112255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.454557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTGG CGGGCGTCAC GGCCCGTCAC GATTGGATAG ACCGACAAAT GCGCGTCACG 
GGGTACGCAC CCGTGCAGTC GGAAACGGTA TGGAGGAACG TCAATCTAAC ACTCGGTGCC
GCCGTCCAAG CCGTCGTCGA ACACTTGCAG TTGAATCCGC CGGAAGTTAT CGAAATTCAC
GATGAGGGAC TCCGCAGCAT ACAACCCACA CAACCTCCGC CGTCGCTTGC CATTCGTACC
AACGGAAGCA GCAACGGTCA CGCCAACGGG CACAGTGTCG GTTACACCCA AAGCCGTCGT
ACGACCTCAC GGTCCGCCGC CCAAGCTCTG ATGGAGGCCG ACGACGTTCC GCCCACCTAC
TCCACCGTTG CGGAAGTTCC ACAAATTGAT ACTCCCTCGA TTCCAATCGA GTTTGAAGAA
GTGAAGCACC TCACTCGTAC GCAATTGGAC GATCTGCTCA CGAACGAAAC GTCCTTTTTG
GCCTGGGTCA ATGGCCTCGC ATTCACCACC ACCTTGCGCA TCATGGCCAC CTCCGTCCTC
GAGGAAAATG TCCAGACCGC CCAGAATCAT TTGGAACAAC AAACGCGCAT GGACACTTTG
TACGGACAAG TCACCGCACT ACACCATGAA TTGCGCAAGG CCGTCGGGGA ATTCGAAGTT
TTAGAGCGTC AACAGGACGC ATTGTGCGCC CCGCCCGATA CGATCATAGT CCGTCAGGAA
TTACAAGTAC TCAAGCGGCA AGCCTTGGAC GAGTCGGAAG CTCACGCGGA AACCTGGTTG
GACGAAACCG CGCAAGATTC GGTCGACGTG GACGCGTTTG TGCGGGATTT TGTCACCACC
CGCACACGGC ACCACGAACG CGCCGCCAAA CTGGAACTAC TCCAACGACA AGCGCACAAA
TCGTTATAG
 
Protein sequence
MTLAGVTARH DWIDRQMRVT GYAPVQSETV WRNVNLTLGA AVQAVVEHLQ LNPPEVIEIH 
DEGLRSIQPT QPPPSLAIRT NGSSNGHANG HSVGYTQSRR TTSRSAAQAL MEADDVPPTY
STVAEVPQID TPSIPIEFEE VKHLTRTQLD DLLTNETSFL AWVNGLAFTT TLRIMATSVL
EENVQTAQNH LEQQTRMDTL YGQVTALHHE LRKAVGEFEV LERQQDALCA PPDTIIVRQE
LQVLKRQALD ESEAHAETWL DETAQDSVDV DAFVRDFVTT RTRHHERAAK LELLQRQAHK
SL