Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32539 |
Symbol | |
ID | 7197396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 171937 |
End bp | 172845 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177879 |
Protein GI | 219112255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.454557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTGG CGGGCGTCAC GGCCCGTCAC GATTGGATAG ACCGACAAAT GCGCGTCACG GGGTACGCAC CCGTGCAGTC GGAAACGGTA TGGAGGAACG TCAATCTAAC ACTCGGTGCC GCCGTCCAAG CCGTCGTCGA ACACTTGCAG TTGAATCCGC CGGAAGTTAT CGAAATTCAC GATGAGGGAC TCCGCAGCAT ACAACCCACA CAACCTCCGC CGTCGCTTGC CATTCGTACC AACGGAAGCA GCAACGGTCA CGCCAACGGG CACAGTGTCG GTTACACCCA AAGCCGTCGT ACGACCTCAC GGTCCGCCGC CCAAGCTCTG ATGGAGGCCG ACGACGTTCC GCCCACCTAC TCCACCGTTG CGGAAGTTCC ACAAATTGAT ACTCCCTCGA TTCCAATCGA GTTTGAAGAA GTGAAGCACC TCACTCGTAC GCAATTGGAC GATCTGCTCA CGAACGAAAC GTCCTTTTTG GCCTGGGTCA ATGGCCTCGC ATTCACCACC ACCTTGCGCA TCATGGCCAC CTCCGTCCTC GAGGAAAATG TCCAGACCGC CCAGAATCAT TTGGAACAAC AAACGCGCAT GGACACTTTG TACGGACAAG TCACCGCACT ACACCATGAA TTGCGCAAGG CCGTCGGGGA ATTCGAAGTT TTAGAGCGTC AACAGGACGC ATTGTGCGCC CCGCCCGATA CGATCATAGT CCGTCAGGAA TTACAAGTAC TCAAGCGGCA AGCCTTGGAC GAGTCGGAAG CTCACGCGGA AACCTGGTTG GACGAAACCG CGCAAGATTC GGTCGACGTG GACGCGTTTG TGCGGGATTT TGTCACCACC CGCACACGGC ACCACGAACG CGCCGCCAAA CTGGAACTAC TCCAACGACA AGCGCACAAA TCGTTATAG
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Protein sequence | MTLAGVTARH DWIDRQMRVT GYAPVQSETV WRNVNLTLGA AVQAVVEHLQ LNPPEVIEIH DEGLRSIQPT QPPPSLAIRT NGSSNGHANG HSVGYTQSRR TTSRSAAQAL MEADDVPPTY STVAEVPQID TPSIPIEFEE VKHLTRTQLD DLLTNETSFL AWVNGLAFTT TLRIMATSVL EENVQTAQNH LEQQTRMDTL YGQVTALHHE LRKAVGEFEV LERQQDALCA PPDTIIVRQE LQVLKRQALD ESEAHAETWL DETAQDSVDV DAFVRDFVTT RTRHHERAAK LELLQRQAHK SL
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