Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32535 |
Symbol | |
ID | 7197394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 163773 |
End bp | 164885 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177574 |
Protein GI | 219111645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.264951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG ATACAGATCG AGAACGCCGA TCTGGCTTAC TGGTTCTACT GACGGTTCCC GTCGCCTGGG GGACGTTTGA ACCCGCCGTA CGCTACCTCT ACACTATCGA TCCGCCTATT CCCGGCTTTG TTTTCTCGAC GTGTTATTAT CTTGTAGCGT CCAGCTCACT GTACTTAGCT TGCTTTTTAT CACAAACAAA GAAATCGGAC GGGAACAAAT CATTGGAGGT ATCACAGCCA TGGCCTATAC AAGGCGGCTT GGAACTCGGT TCGTATCTTT TTGTTGGCAA CGCCTTGCAG GTCATCGGGC TGCAAACGGT CCCCTCCGAC CGAGCCGCAT TCTTGCTACA GCTGACGACC ATATTTGTTC CTCTCCTGGA CGCAACCTTA GCGAGAAATC TCTACGCCAT CCCTGGCCGC ACGTGGATGG CTTGCTGGAT CGCCTTGGCA GGGGTTGCTA CCATGGGCTT AGATAGGAGT AACACCTCCA ACTCTTTCCA AAATCTGGAG CCTTCCCTCG GTATTCTGAA CGATGTATTA TCCCAACTTT CTGGCGGCGA CGCATTCATC GTTGCCGCAG CCATTGCTTA CACATTCCAT TGTCTCCGAC TAGAAAGTTA CGCACAGTCA ACTTCGGCAG TCCAGTTGGC GGCCAGCAAA GCCACAACGG AAACCGTGCT GAGTGCGGCT TCGGTTGCTG GTTTAATCTG GTATAGCAGC AGTACCGGGT ATGATAAGCT TTCCGTCGAG GAACTTAAGA CCCACAGCGA CCACCTGAAC AGCTTGGCAA GCTTTGCAAG GCAAACAGGA CAAGAAATTG TCAACTTTCT CTCTTCTGTG GAAAATGGAA TAGCTTCCGG TTCCGTTTCC TTCGCCACAC TGCGACCAGC TTTGCTAGCC ACATTGTGGA TCGGTCTCGT GACGGTGGCA TATACCATTT ATGCCCAATC ATACGGGCAA AGTCGAATTC GTCCCGTCAC GGCAAATCTG ATTTACACCA TTCAACCAAT CTGTACAGCT CTTTTTGCTT GGTTTCTGCT GGGTGAAAGT CTTGGACCTG CCGGCTATGC TGGGGGCGCT TTGATTGGAG CGGCAGTGCT TTTGGTAGCT TAG
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Protein sequence | MSKDTDRERR SGLLVLLTVP VAWGTFEPAV RYLYTIDPPI PGFVFSTCYY LVASSSLYLA CFLSQTKKSD GNKSLEVSQP WPIQGGLELG SYLFVGNALQ VIGLQTVPSD RAAFLLQLTT IFVPLLDATL ARNLYAIPGR TWMACWIALA GVATMGLDRS NTSNSFQNLE PSLGILNDVL SQLSGGDAFI VAAAIAYTFH CLRLESYAQS TSAVQLAASK ATTETVLSAA SVAGLIWYSS STGYDKLSVE ELKTHSDHLN SLASFARQTG QEIVNFLSSV ENGIASGSVS FATLRPALLA TLWIGLVTVA YTIYAQSYGQ SRIRPVTANL IYTIQPICTA LFAWFLLGES LGPAGYAGGA LIGAAVLLVA
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