Gene PHATRDRAFT_32471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32471 
Symbol 
ID7197067 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp31251 
End bp31961 
Gene Length711 bp 
Protein Length157 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177541 
Protein GI219111579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTG TTGCTCCCGT CCTTTTCGTA CTTCTTCCTT TGGCAACTGC CTTTACCGGA 
TCGTCTTCCT TTGCCGGTGC GTCCATCGGA ATTTCGACTG CCAGAGAGGA ACAATCCAGC
TTGACGATGG AATATATTCG TAAGTCCAAC GAACGGTAAA ACTGTATTGA CTGTGAGCAA
GGATGGCCTT TCCTCTGTAT CTGCTATAAT ATATCTATCC AGAATCTGAC ATCGCGTATC
GGGGTCTGTC GTTCTCTCAG CTAGTGGAAT GAGCAAAGAA CAGTGGCGCA AGGTCAAGGA
AGCCGAAAAG TCCAAGAACA ACGGCAAGAA TCTCGGAAAG ACTGGCATTA CAACCTTCAA
GTCCCGGTCT TTTATGGATT GGCAAAAAAG CGGTGGCAAG AATCTTTTCC CAGTGGACCC
TACTAAAGTC AAGAGCCCAA AAGACCTTCC TTACATGTAC GTATTTGACT CATCCTCTGC
CAACAACGAT TAAGTGGTAT CTCGCATCGA CATCTGTGAA GACTGTTTGA AAAGGACTCA
TTTCTTACTT TGCTATGCAC TTCTCCTTTT AGGCAACGCC CAGGCGGTAT GCCCGATGAT
TCGGACCTGA AAAAACCTAA CCCTTTCAGT AACATGTTTA GCTTTGGTGG CAAGAAGAAG
GTGGACGAGC CCGAACCGGA AGAAAAGAAA ACCAACTGGT GGACTTTGTA A
 
Protein sequence
MKSVAPVLFV LLPLATAFTG SSSFAGASIG ISTAREEQSS LTMEYIPSGM SKEQWRKVKE 
AEKSKNNGKN LGKTGITTFK SRSFMDWQKS GGKNLFPVDP TKVKSPKDLP YMQRPGGMPD
DSDLKKPNPF SNMFSFGGKK KVDEPEPEEK KTNWWTL