| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_25417 |
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| Symbol | GMD1 |
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| ID | 7197497 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 1050507 |
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| End bp | 1051858 |
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| Gene Length | 1352 bp |
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| Protein Length | 363 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | gdp-mannose 4,6-dehydratase |
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| Protein accession | XP_002178058 |
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| Protein GI | 219112613 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.807653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAATCCTTGG TATCGTTCGT CTTACAAAAT CTTTACGGGA ATTCCGCGTC GATCAGACCT
TTCGACAGCG TGTTTCCTAT TCTTCTGGAT CCCAAGTCGA AATAAAAGCA CTCATCAATA
GAAAGATGTC GGAATGCGAA GGACGTGTTG CACTCGTTAC CGGTATTACG GGACAGGATG
GGTCTTACCT TGCGGAACTA TTGCTGGACA AGGGCTACAC GGTAGGTTAT TCATAAAATC
CGTAATTCAT TCTTGTCCTG CTGATTCATT TTTCTAACCC GGCGTGTCGT CGATGTCAGG
TACACGGTAT TGTCCGTCGG TCTTCTTGCT TCAACACGGG TCGTATTGAT CATCTTTACC
GTGATCGTCA CGACACGCAA GTAAAGCTCT TCTTGCACTA CGGCGATCTG TGCGACGCCA
GCAATTTGAT CACGATCATT TCGTCCGTCA AGCCCGATGA AATCTACAAT CTGGGTGCCA
TGAGCCACGT CAAGGTCTCC TTCGACATGC CCGAATATAC GGCTGACTGC GACGGACTCG
GTGTTCTGCG CATGTTGGAC GCTGTACGTG CGGCGGGCTT GGAACAGTCA GTCAAGTTTT
ACCAAGCTTC CACCAGTGAA CTCTACGGCA AGGTTCAAGA AGTTCCGCAA TCCGAAACCA
CTCCTTTTTA TCCCCGTTCC CCTTATGCTG TTGCCAAGCA GTACGCCTTT TGGATTCTCG
TCAATTACCG TGAGGCCTAC GGCATGCACT TGACAAACGG GATTTTGTTC AATCACGAGT
CTCCTCGACG TGGTCGTACC TTTGTGACCC GCAAGATTAC ATGCGCGGTG GCTGCTATTA
AAGAAAAGCA ACAGAAGACT CTTTATCTAG GAAACCTTGA CGCCAAGCGC GATTGGGGCC
ACGCACGTGA TTACGTCGAA GGCATGTGGA TGATGCTCCA ACAAGAGACT TCGGACGATT
ATGTCTTGGC GACGGGAGAA ACGCACACCG TGCGTGAATT CGTGGAGCTC GCTTTTGCCG
CAGTCGATAT TACCGTCAAA TGGAAGGGTG AGTTCGGTAC TATTGATGAA ATCGGCGTCG
ATGCGGATAA CGAAGATCAC ATCCTTGTCA AGATCGATCC ACGATACTTC CGTCCTACGG
AAGTTGAGCT CTTGTTGGGA GATCCCACCA AAGCGAAGGA AAAGCTTGGA TGGACTTCGT
CTACGCCTTT CCCCGATTTG GTCAAGGAAA TGGTGAAAGA AGATCTCGCG ATGGTTCGTG
GTACTAGCGT AGATCCGGAA AAGTTACTCG ACTGAATGTT TCAGATCGAT TACAGTTAGT
GTGGCAAAAT AAAGATTTCT TTGTACAAGC GA
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| Protein sequence | MSECEGRVAL VTGITGQDGS YLAELLLDKG YTVHGIVRRS SCFNTGRIDH LYRDRHDTQV
KLFLHYGDLC DASNLITIIS SVKPDEIYNL GAMSHVKVSF DMPEYTADCD GLGVLRMLDA
VRAAGLEQSV KFYQASTSEL YGKVQEVPQS ETTPFYPRSP YAVAKQYAFW ILVNYREAYG
MHLTNGILFN HESPRRGRTF VTRKITCAVA AIKEKQQKTL YLGNLDAKRD WGHARDYVEG
MWMMLQQETS DDYVLATGET HTVREFVELA FAAVDITVKW KGEFGTIDEI GVDADNEDHI
LVKIDPRYFR PTEVELLLGD PTKAKEKLGW TSSTPFPDLV KEMVKEDLAM VRGTSVDPEK
LLD
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