| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_25298 |
|---|
| Symbol | |
|---|
| ID | 7197555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 672225 |
|---|
| End bp | 673849 |
|---|
| Gene Length | 1625 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177662 |
|---|
| Protein GI | 219111821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TAGGAAGGAA ATTTGCGTCT TTCTTTCGTG AAAACCGAGA ACACACAAAG CATACTTACC
TTGAGCAATA CAACGCTACC GGACAAGCGG CTACTCTACT TACCCGAACA ATGGCAGCTT
TACCAGTTGG AGATGCCTGG CAGAAGGGAA ATGAAGAGGA CGTTTCCATT CTGCACAACT
GCTTCTGCCC TAGTTGTGGC AAAAGCAACG GGGTGACTAC GATGCTTCCT ACTCGCGTGC
CCATGTTTCG TGAGATTATT CTCATGAACT TGAATTGTGA AGACTGCGGA TTTCGCAACG
CGGAAGTAAA TTTTGGTGGA GAAATCCAAG AAAAGGGTGA AAAGTTAACC TTAACCGTCA
ACAGCTCGGA CGATCTCAAC AGGCAGCTCA TCAAGTCGGA TTCGGCTTCT CTCTATATTC
CGCGACTTGA TTTTGAAATT CCGCCAACCA CCCAGCGTGG AACTGTTTCC ACATTGGAAG
GAGTGCTGCG ACGGGCTGCC AAAAATTTGG AAGAGCTACA GCCCGAGCGT CTACGTTTGG
GCGATGTCGA CAACTTCCAC CGTTGCAAAC GTGTGGTCGA AGAGCTCCGT CGCTTCTCGG
GGGAAGCCTG TGCAGACAGT GACGACGATA GTGGAGAGGT TGAAAAGCAA GAGTCGGTTT
TCCCCTTTGC AATTGTGCTG GACGATCCTG CCGGAAATTC ATTCATCGAA AACCCTCGGG
CGCCGCATCA CGATCCGCAC ACCAAATCGG AGAAATATTT CCGGACACCA ACACAAGATA
TGGCTCTAGG GTTGCAACCG TCTCAGCAAG CCGTGGAAGA AGGGGTCATC AACGATGCTA
ATCCAGAACA CAAAAACATT GCCAACGCAC CACAGGGATC TCATACGATA GAGAGAGATC
ATTTAGGTGT TGGTCGTCAA GAAGCAATAA AATTTACCAC TACATGTCCG CATTGCCATT
GTCCAACCGA AACAGATATG TGTATGACAG AAATTCCTCA CTTTAAAGAA ATCATCATCA
TGTCTATGTT CTGTGAATCC TGTGGTTTCC GGAGTAACGA AATCAAGGGT GGTGGAGCCA
TTCCCAAGTA TGGAACCACT ATCACACTCA GGGTGAAAAC GCCTGATGAT TTGGCTCGAG
AAGTTTTGAA GAGCGATACT GCCGGTATTG CTATACCAGA AATAGACTTG GAGCTAGCAG
AAGGAGGTCT CGATGGTTTG TATACTACAG TTGAAGGCCT TTTGCAGAAA ATGCGCGATC
GCCTGACGAA GGCCAATCCT TTTGGTAGCG GTGATTCAGC GATAAAACAG CACTTAACCA
ATGACGGTGG CGAGTTTTCG GGATTGAGTC CCAATCAAAA ACGATATATG GCTTTTTTAC
AGAAACTGAA AGACTTGGCG GACGGTATCG TGCTTCCATT TACACTTGTC ATTTCCGATC
CCCTGTCCAA CTCGTTTGTT GGTCCTGTGC GACAAGATGC AATCGCACTG TCGTTGCAGG
CCGAGAAAGA CGGAAACAAC CAATGTTATG AAGCATATGT CGATGACGGC ATGGAGGTGG
ATGAATACGA GCGTACACAC GATCAGAATG AAATATTGGG ATTGAATGAT ATGAAAACTG
AGAAC
|
|---|
| Protein sequence | MAALPVGDAW QKGNEEDVSI LHNCFCPSCG KSNGVTTMLP TRVPMFREII LMNLNCEDCG
FRNAEVNFGG EIQEKGEKLT LTVNSSDDLN RQLIKSDSAS LYIPRLDFEI PPTTQRGTVS
TLEGVLRRAA KNLEELQPER LRLGDVDNFH RCKRVVEELR RFSGEACADS DDDSGEVEKQ
ESVFPFAIVL DDPAGNSFIE NPRAPHHDPH TKSEKYFRTP TQDMALGLQP SQQAVEEGVI
NDANPEHKNI ANAPQGSHTI ERDHLGVGRQ EAIKFTTTCP HCHCPTETDM CMTEIPHFKE
IIIMSMFCES CGFRSNEIKG GGAIPKYGTT ITLRVKTPDD LAREVLKSDT AGIAIPEIDL
ELAEGGLDGL YTTVEGLLQK MRDRLTKANP FGSGDSAIKQ HLTNDGGEFS GLSPNQKRYM
AFLQKLKDLA DGIVLPFTLV ISDPLSNSFV GPVRQDAIAL SLQAEKDGNN QCYEAYVDDG
MEVDEYERTH DQNEILGLND MKTEN
|
|---|
| |