Gene PHATRDRAFT_25217 details

Gene Information

• Locus tag: PHATRDRAFT_25217
• ID: 7197418
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 318213
• End bp: 320400
• Gene Length: 2188 bp
• Protein Length: 635 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002177909
• Protein GI: 219112315

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.657092
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACTCATAGT TACATCGACT CGATTGGTGA CTCTACCTGT CTTTCTACGT TTGGCTTCTT 
CAGTTTGGCA ACAATCTTCG TTAGCTATCT ATCTATCATC ATCATGCAAG CCGATAAACC 
GATGGAACCG ACCGTGGAGC AGGGTCAGCC GAATCACAGA GACTTTGGCA ATCTGAAAGA 
ATTCAAAGTC CAACATTCGA CTCTCCGGGA TGATCCTTTT GCCATTCGTC CGGGCAAGAC 
GTTGCTGTGG ACCGGCGTTA GTATGACACT ACAGCCTTCC AAGAAAAAGG AAGAGCCGCG 
AGCTTTGCTC AAGAACGTTT GGGGCGAAGT TCCCGCGGGG AAAGTCACGG CAATCTTGGG 
TCCGTCGGGT GCCGGCAAGG TATGATTTCT TATACATGTT GCCACATACG TAATCACGAC 
CTATCCGAGC GCATCTCTTT GTATCTCACG AATTTTCTCT ATCGCTCTCG GTAGACGAGC 
CTTTTGAACA TTTTGGCGGG CCGGACAATT TCTAGTTCCA ACCTTACCGT CACTCATAAC 
GTCCGTGTCG ACACGTTTCA GGTGGACCCA GCCCGTCAAT CCATGCGACG TCAGATTGCC 
TTTGTCGCCC AGGAGGACAG TCTCCCTGCC GCCACCACGC CCCGCGAAGC CATTCGCTTT 
TCCGCACGCC TGCGCCTCTC CAAGGACACC ACCGACGAAG AACTGGAAAC TCTCACCAAC 
CGCATGCTAC AGGAACTCGG ACTAGAAGCC GCCGCAGATA CCATCGTTGG CAACGCATTG 
ATTAAAGGAA TATCGGGTGG CGAGCGTAAA CGCGCATCGG TGGGGGTGGA ATTGGTCACT 
CGACCAGCGC TCGTGTTTTT GGACGAACCC ACCTCCGGTT TGGATAGTTT TGCCGCTGTC 
AAGTTGGTTA ACTTGTTGAA AAAGGTGGCA TCGGCGGGTT CGTCTGTCCT ATTCACCGTT 
CACCAACCAG CTTCGGAAAC TTTCGCGAGT CTGGATCAGG TCATATTCAT GGCGCATGGG 
CAAGTCGTTT ACCAAGGGTC TCCCGAGAAA GTGCCGGAAT ACATGGAAGA TCGAAACAAG 
TCGGTACCAG AACACGCCAA CCCCGCCGAT TGGATGTTGA TGGTGACCCA GACGATGAGC 
GAAGACGAAC TGGCAAAGGA CAATTTCTTT TCGGTTGACG AACGGAATTT ACCCGAAGCC 
GAACCAATGC CGAAAGGCCA AAGCATGATG GCCAAAACTA TGCACTCGGA ATCAGGGGCG 
ATTGTGGAAG TTCAGAAAAT CTCCATTTTT GTTCAGATTT ATGAACTTCT ATATCGCGAT 
ATCGTCAACA CTGGTCGCGA TACGACAGCT CTTTTGACTC GTTTTGGGGC ATCCATCTTT 
TTGGGATTGG TGATCGGGGT CGTCTACCAG GGTGTCGGTG CAACTGACTT GTCCGACGCG 
ATTGACCTCC AGAGCCATTT TGGAGGAATG ACCATGGTTT TGATTCAGGC CATGTTTGGT 
ACAGGAATTT CCATTCTGCT CGAGTTCCCT ACCGAACGTC CCGTGTTCTT GCGAGAGTAT 
ACCACAGATC ACTACCACAT TGGGGCCTAC ATCTTTGCTA AGTTTGTCAT GGAGGCGGTG 
TTGACGTTTC TCAAGGTCAT GTGTGAAGCC TTGATTCTTT ACTATCTGAT GGAATTACAG 
ATGCCCTTTT TGACTTACTT TGGAATCCTG TACATGCTCG CCATGGCCAG TGCGGCAATT 
GCGGTGCTCT TTGGCTCGGC CATGGACGAT CAAAAGGTAG CCCAGGAAAG TTTGCCTATC 
CTTTACGTTC CACAGTTTCT GTTTTCGGGA TTCTTCATAA GTATAACGCT CATCCCTCCT 
TACTTGCGTT GGGCGCAATA CCTGTGCTCG CTGACCTACG CCATTCGCCT ATCGGTGGTG 
AACGAGTTCG ACAACTGCGT GGGACCGGAC GCGCAGCAGA ACTGCAACGA TCTGTTTGAA 
GAATTGCAAG TGGATCGGTC TGACGTATGG TGGTACTGGC TAATGATTAC CGTCATCTTT 
CTGATACCAC GAATCGGAGC CATGTTCGCA CTAAAGCAGT CAGCCAAGCG GTTTTATTCG 
AACTAACATT TTAAGAGAAT CCTTATGGAA GGACCGACCT TGGTATCCGA GGACTACTCC 
ATTATTTAAA TGTTGTGCGT ATTTGTGT 

 

Protein sequence

MQADKPMEPT VEQGQPNHRD FGNLKEFKVQ HSTLRDDPFA IRPGKTLLWT GVSMTLQPSK 
KKEEPRALLK NVWGEVPAGK VTAILGPSGA GKTSLLNILA GRTISSSNLT VTHNVRVDTF 
QVDPARQSMR RQIAFVAQED SLPAATTPRE AIRFSARLRL SKDTTDEELE TLTNRMLQEL 
GLEAAADTIV GNALIKGISG GERKRASVGV ELVTRPALVF LDEPTSGLDS FAAVKLVNLL 
KKVASAGSSV LFTVHQPASE TFASLDQVIF MAHGQVVYQG SPEKVPEYME DRNKSVPEHA 
NPADWMLMVT QTMSEDELAK DNFFSVDERN LPEAEPMPKG QSMMAKTMHS ESGAIVEVQK 
ISIFVQIYEL LYRDIVNTGR DTTALLTRFG ASIFLGLVIG VVYQGVGATD LSDAIDLQSH 
FGGMTMVLIQ AMFGTGISIL LEFPTERPVF LREYTTDHYH IGAYIFAKFV MEAVLTFLKV 
MCEALILYYL MELQMPFLTY FGILYMLAMA SAAIAVLFGS AMDDQKVAQE SLPILYVPQF 
LFSGFFISIT LIPPYLRWAQ YLCSLTYAIR LSVVNEFDNC VGPDAQQNCN DLFEELQVDR 
SDVWWYWLMI TVIFLIPRIG AMFALKQSAK RFYSN