Gene PHATRDRAFT_25183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_25183 
Symbol 
ID7197096 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp168138 
End bp169295 
Gene Length1158 bp 
Protein Length334 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177575 
Protein GI219111647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.181735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGGAAAATC GTCTCCGGAT CCAGTATGAC AACAGCAACG ACCAAGAAGC TCCCGATCTT 
GACCGACGAA CCGTCGTCAT GGGAGGGATC GAGTCTTCTT TCCGTCACTC AGATTACGGC
GGCGGGGTTG GAGCTCCTCT TTCGCGTCAC CCAGGAAATG CGCACACTCG TACGCACACA
CGGCGGAGAC GACCGCTTGC GGCACACGAT ACTCGGTACG GTGTTCTTCG AGGCCTCTAC
ACGAACGTCG GGTTCTTTCC AGGCCGCCAT TCTGCGACTT GGTGGGCGGA ACGTACACGT
AGATGGTCAG GGCAATTCCT CCGCGGCGAA AAAGGGCGAA TCCCTCGAGG ACACTCTGCG
GTGTTTGGAA TGTTACGTCG ATGTAACGGT ACTGCGGCAT CCCGTGCAGG GTAGTGTCGG
GAAGGTGGTG AACGTGTGCG AAAAGCCTGT GCTGAATGCC GGTGACGGCG TAGGTGAACA
CCCAACGCAG GCACTCCTCG ACGTTTTTTC CATCTACGAT GAACTCGAGC TGGGAGAGAA
TAACGACAAA AAGCCACTCG TGGTGGTACT GTTGGGGGAC TTGAAAAACG GAAGAACGGT
CCACTCGCTG GCGAAACTGT TGAGTGTGTC GCAAATATGG GGCGAGACCT TGACGCTACG
TTACTGTGCT CCGTCAGGAT TGGAAATGCC CCAATATATT CGCGATTTTT GCGACGCCGT
TCCTAGTGTC CAACAAGAAA CGTGCAGTGA CTTGGCCGAC GCTTGTCGAG ATGCCCATGT
CTTGTACGTG ACCCGGATTC AGCGAGAGCG TTTTGAATCC GACGAAGCCT ACGAAGCGGT
CAAGGTACGA CGGCGTGTCG TCGGTAGTGA GGTCCACCGA CGGAGTGCTG TTTGCCAATT
CACTCGATTC TCATGAGTAT TGTACGATTT CGATTGTTTA CAGGGATCCT ACATTGTGGA
CAAGGCCTTC ATGACGAATG CACCACCCAA AATGATCGTC CTACATCCAC TGCCACGCGT
GGACGAAATT TCTACCGATT TTGACAGCGA TCCGCGTGCT GCGTACTTTC GACAAATGGA
AAATGGCATG TTTGTGCGAA TGGCACTGTT GGCCTTGGTT TGCGGTAAAA CCTAGACTGC
CGAAACACGC ATCAATGG
 
Protein sequence
MTTATTKKLP ILTDEPSSWE GSSLLSVTQI TAAGLELLFR VTQEMRTLVR THGGDDRLRH 
TILGTVFFEA STRTSGSFQA AILRLGGRNV HVDGQGNSSA AKKGESLEDT LRCLECYVDV
TVLRHPVQGS VGKVVNVCEK PVLNAGDGVG EHPTQALLDV FSIYDELELG ENNDKKPLVV
VLLGDLKNGR TVHSLAKLLS VSQIWGETLT LRYCAPSGLE MPQYIRDFCD AVPSVQQETC
SDLADACRDA HVLYVTRIQR ERFESDEAYE AGSYIVDKAF MTNAPPKMIV LHPLPRVDEI
STDFDSDPRA AYFRQMENGM FVRMALLALV CGKT