Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_25183 |
Symbol | |
ID | 7197096 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 168138 |
End bp | 169295 |
Gene Length | 1158 bp |
Protein Length | 334 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177575 |
Protein GI | 219111647 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.181735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAGGAAAATC GTCTCCGGAT CCAGTATGAC AACAGCAACG ACCAAGAAGC TCCCGATCTT GACCGACGAA CCGTCGTCAT GGGAGGGATC GAGTCTTCTT TCCGTCACTC AGATTACGGC GGCGGGGTTG GAGCTCCTCT TTCGCGTCAC CCAGGAAATG CGCACACTCG TACGCACACA CGGCGGAGAC GACCGCTTGC GGCACACGAT ACTCGGTACG GTGTTCTTCG AGGCCTCTAC ACGAACGTCG GGTTCTTTCC AGGCCGCCAT TCTGCGACTT GGTGGGCGGA ACGTACACGT AGATGGTCAG GGCAATTCCT CCGCGGCGAA AAAGGGCGAA TCCCTCGAGG ACACTCTGCG GTGTTTGGAA TGTTACGTCG ATGTAACGGT ACTGCGGCAT CCCGTGCAGG GTAGTGTCGG GAAGGTGGTG AACGTGTGCG AAAAGCCTGT GCTGAATGCC GGTGACGGCG TAGGTGAACA CCCAACGCAG GCACTCCTCG ACGTTTTTTC CATCTACGAT GAACTCGAGC TGGGAGAGAA TAACGACAAA AAGCCACTCG TGGTGGTACT GTTGGGGGAC TTGAAAAACG GAAGAACGGT CCACTCGCTG GCGAAACTGT TGAGTGTGTC GCAAATATGG GGCGAGACCT TGACGCTACG TTACTGTGCT CCGTCAGGAT TGGAAATGCC CCAATATATT CGCGATTTTT GCGACGCCGT TCCTAGTGTC CAACAAGAAA CGTGCAGTGA CTTGGCCGAC GCTTGTCGAG ATGCCCATGT CTTGTACGTG ACCCGGATTC AGCGAGAGCG TTTTGAATCC GACGAAGCCT ACGAAGCGGT CAAGGTACGA CGGCGTGTCG TCGGTAGTGA GGTCCACCGA CGGAGTGCTG TTTGCCAATT CACTCGATTC TCATGAGTAT TGTACGATTT CGATTGTTTA CAGGGATCCT ACATTGTGGA CAAGGCCTTC ATGACGAATG CACCACCCAA AATGATCGTC CTACATCCAC TGCCACGCGT GGACGAAATT TCTACCGATT TTGACAGCGA TCCGCGTGCT GCGTACTTTC GACAAATGGA AAATGGCATG TTTGTGCGAA TGGCACTGTT GGCCTTGGTT TGCGGTAAAA CCTAGACTGC CGAAACACGC ATCAATGG
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Protein sequence | MTTATTKKLP ILTDEPSSWE GSSLLSVTQI TAAGLELLFR VTQEMRTLVR THGGDDRLRH TILGTVFFEA STRTSGSFQA AILRLGGRNV HVDGQGNSSA AKKGESLEDT LRCLECYVDV TVLRHPVQGS VGKVVNVCEK PVLNAGDGVG EHPTQALLDV FSIYDELELG ENNDKKPLVV VLLGDLKNGR TVHSLAKLLS VSQIWGETLT LRYCAPSGLE MPQYIRDFCD AVPSVQQETC SDLADACRDA HVLYVTRIQR ERFESDEAYE AGSYIVDKAF MTNAPPKMIV LHPLPRVDEI STDFDSDPRA AYFRQMENGM FVRMALLALV CGKT
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