Gene PHATRDRAFT_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_2182 
Symbol 
ID7197311 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp862460 
End bp863635 
Gene Length1176 bp 
Protein Length360 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177703 
Protein GI219111903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGCGTGGTAC GACATGACAA GAATACGAAA GACCCCGGCA TTCCCAACTC GTGGCCCTTT 
AAACAGGATC TTTTGAAAGA AATCCAGCGT TCACGGGAGC GTCAACAGCA GTTGCAACAA
GAAACGAAGG ATCAACGCCA AACCGATCTG AAAGCACTTC GGGATCATCA AGAACAGGGC
GGCACTGCAC GGACAGTAAA GGAGCTTATG GAACAAGCCA ATCGCGACCG GGCTCAGTAT
GCCGCTAAAC AAGAAGAAGA GGACAACAGC GACGATGATG GAGATTCTGG CGAAGGACAG
CGTAAGGATG GTACTAAGGC TGCGGGGCAA CAGTCTCGTC GAGCTTATTT GCGCGAGTTG
AAAAAAGTTG TTGACACGGC AGACGTTGTC TTGCAAGTTT TGGATGCCCG GGATCCGATG
GGATCGCGGA TCAGTCCAGC CATAGAAAAC GTTATTCTTT CACGTGCCGA TAAGCGTATG
GTACTGGTTT TAAATAAGAT TGATTTGGTA CCGAAAGAAG TTGTCGGGAG CTGGTTGACA
ACCTTGCGAC GATCACATCC TGCAATCGCC ATCAAGGCGA GTCAGCATGG GTCATCGAAT
AGTGATGATA CAACTTCTTC CGCTACTACT GTAACGGTTC CGGTTGGTAT GGATGGTCTG
TTGCAGTTGC TCAAGAACTA CGCACGTACT GGAGGAACCG GTGGCAAAAG CAAGACAACC
ATTGTGGTTG GAATAATTGG GTACCCAAAT GTTGGCAAGA GTAGTATCAT TAATGCTTTG
AAGCGATCAC GTGCGGTTGG TGTCAGTCCC AGGCCAGGTT TCACAACTAC GATGCAGGAA
GTTGTTTTGG ACCGCAATGT TCGACTATTG GATAGTCCTG GAGTGGTGTT CGATGACAGG
TCCGCTTTGC TAGGAAATTG CGTCGATGCA GAATCTATTG AGGATCCCAT TCCACCCGTG
ACGGCTTTAC TAAAGCGTTG CAATCATGCG AGTTTGCTAA TGACCTATAA CATTCCGGCG
TTTCCACCTG GCGAAGTCAT GATGTTCTTG GCCATGGTGG CACGTTCGTA TGGGCGTGTT
CTCAAGGGTG GCATCCCGGA TAAAGAGGCC GCAGCGCGAG CAGTACTAAA GGACTGGAAT
AATGGAAAGA TTCCATACTA CACTGCTCCG CCTAAA
 
Protein sequence
GVVRHDKNTK DPGIPNSWPF KQDLLKEIQR SRELKELMEQ ANRDRAQYAA KQEEEDNSDD 
DGDSGEGQRK DGTKAAGQQS RRAYLRELKK VVDTADVVLQ VLDARDPMGS RISPAIENVI
LSRADKRMVL VLNKIDLVPK EVVGSWLTTL RRSHPAIAIK ASQHGSSNSD DTTSSATTVT
VPVGMDGLLQ LLKNYARTGG TGGKSKTTIV VGIIGYPNVG KSSIINALKR SRAVGVSPRP
GFTTTMQEVV LDRNVRLLDS PGVVFDDRSA LLGNCVDAES IEDPIPPVTA LLKRCNHASL
LMTYNIPAFP PGEVMMFLAM VARSYGRVLK GGIPDKEAAA RAVLKDWNNG KIPYYTAPPK