Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_2182 |
Symbol | |
ID | 7197311 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 862460 |
End bp | 863635 |
Gene Length | 1176 bp |
Protein Length | 360 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177703 |
Protein GI | 219111903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGCGTGGTAC GACATGACAA GAATACGAAA GACCCCGGCA TTCCCAACTC GTGGCCCTTT AAACAGGATC TTTTGAAAGA AATCCAGCGT TCACGGGAGC GTCAACAGCA GTTGCAACAA GAAACGAAGG ATCAACGCCA AACCGATCTG AAAGCACTTC GGGATCATCA AGAACAGGGC GGCACTGCAC GGACAGTAAA GGAGCTTATG GAACAAGCCA ATCGCGACCG GGCTCAGTAT GCCGCTAAAC AAGAAGAAGA GGACAACAGC GACGATGATG GAGATTCTGG CGAAGGACAG CGTAAGGATG GTACTAAGGC TGCGGGGCAA CAGTCTCGTC GAGCTTATTT GCGCGAGTTG AAAAAAGTTG TTGACACGGC AGACGTTGTC TTGCAAGTTT TGGATGCCCG GGATCCGATG GGATCGCGGA TCAGTCCAGC CATAGAAAAC GTTATTCTTT CACGTGCCGA TAAGCGTATG GTACTGGTTT TAAATAAGAT TGATTTGGTA CCGAAAGAAG TTGTCGGGAG CTGGTTGACA ACCTTGCGAC GATCACATCC TGCAATCGCC ATCAAGGCGA GTCAGCATGG GTCATCGAAT AGTGATGATA CAACTTCTTC CGCTACTACT GTAACGGTTC CGGTTGGTAT GGATGGTCTG TTGCAGTTGC TCAAGAACTA CGCACGTACT GGAGGAACCG GTGGCAAAAG CAAGACAACC ATTGTGGTTG GAATAATTGG GTACCCAAAT GTTGGCAAGA GTAGTATCAT TAATGCTTTG AAGCGATCAC GTGCGGTTGG TGTCAGTCCC AGGCCAGGTT TCACAACTAC GATGCAGGAA GTTGTTTTGG ACCGCAATGT TCGACTATTG GATAGTCCTG GAGTGGTGTT CGATGACAGG TCCGCTTTGC TAGGAAATTG CGTCGATGCA GAATCTATTG AGGATCCCAT TCCACCCGTG ACGGCTTTAC TAAAGCGTTG CAATCATGCG AGTTTGCTAA TGACCTATAA CATTCCGGCG TTTCCACCTG GCGAAGTCAT GATGTTCTTG GCCATGGTGG CACGTTCGTA TGGGCGTGTT CTCAAGGGTG GCATCCCGGA TAAAGAGGCC GCAGCGCGAG CAGTACTAAA GGACTGGAAT AATGGAAAGA TTCCATACTA CACTGCTCCG CCTAAA
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Protein sequence | GVVRHDKNTK DPGIPNSWPF KQDLLKEIQR SRELKELMEQ ANRDRAQYAA KQEEEDNSDD DGDSGEGQRK DGTKAAGQQS RRAYLRELKK VVDTADVVLQ VLDARDPMGS RISPAIENVI LSRADKRMVL VLNKIDLVPK EVVGSWLTTL RRSHPAIAIK ASQHGSSNSD DTTSSATTVT VPVGMDGLLQ LLKNYARTGG TGGKSKTTIV VGIIGYPNVG KSSIINALKR SRAVGVSPRP GFTTTMQEVV LDRNVRLLDS PGVVFDDRSA LLGNCVDAES IEDPIPPVTA LLKRCNHASL LMTYNIPAFP PGEVMMFLAM VARSYGRVLK GGIPDKEAAA RAVLKDWNNG KIPYYTAPPK
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