| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_18345 |
|---|
| Symbol | |
|---|
| ID | 7197240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 1227114 |
|---|
| End bp | 1228239 |
|---|
| Gene Length | 1126 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178100 |
|---|
| Protein GI | 219112697 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGCTGATCTC GTGTTGGTTG GCAATCCGCA GAGTTGTCGA CCGTGGTGCT GGCACCGATC
GATTCGGACT TTCGCGAGGA TGCGAAGACG CAGCGTCACT TTCCCTTTGT GCGTAGTGGT
ATCGTGTACG GTGTCGTTCC CTGTCAGCGA GGCACGTTCC CGACCCCGTT CGTGTGCGTT
GGCGTGTCCA CCCCCGCAAC AATTGCGCAA TCTGATTGAC GCCGAGCTCG ATGGCACACG
CCCCGACAGT GCCCATTCGC CTATTCTACT GCCGTGCTGT TACGACGGCT TGACGGCCCG
TCTGGTAGCC CGTGCGGGCT TTCCAGCCAC CTTTCTGACG GGCTTTGGCG TGTCCGCCGT
GCACGGCTAC CCCGACACGC AGCTCGTGTC CTACCAAGAG ATGCAGACCA CCGCCACCAC
GGTAGCGGAA GGCTTGTCCC GCGCCGCCCG GGAATTGGGC ACCGCCGCGC CGATTCCTTG
CATTGCCGAC GGCGACACGG GCTACGGCAA CGCCTTGAAC GTCCAGCGCA CCGTGTGGGG
GTACGCCCGG GCGGGCATGG CGGGGATCAT GCTCGAGGAC CAGGTATCCC CGAAACGGTG
CGGTCACGTG GCGGGCAAGA GCGTGCTGGG GGTCGCCGCG GCGGTGGCCA AGGTGCGGGC
GGCGTGCGAC GCTCGGGACG CGTACGGCGC GCAGTACGGT GCCGGTAGTG GGCCGTTGAT
TCTGGCGCGG ACGGACGCGC TGGCCACGGA CGGATTCGAG GCGGCGGTGG AACGGTGTTT
GGCGTTCCGG GAAGCTGGTG CCGATATGAC GTTCTTGGAA GCGCCCGAAT CAATCGAGCA
AATGGCAGAG TATTGCCGGC GTGTGGACGG ACCGAAATTG GCGAATATGT TGGAGCAAGG
ATCGACGCCG ATTCTGTCGC CGGCGGAATT GAAGCAAATG GGGTACACGT TCGCCGCATA
TCCACTAACG CTGCTGTCGT CGTCGATCCG GGCCATGCAA GAAGCTCTAC TATCGATACA
ACAAGGGAAA CCTACGGACG ATTTGATTTG CTCGTTTGGG GAAACCAAGG ATGTGGTGGG
CTTTAGTCAG TACGCCCAGG AGGAAGAGCG GTATCGTGTC GATTGA
|
|---|
| Protein sequence | MRRRSVTFPL CVVVSCTVSF PVSEARSRPR SCALACPPPQ QLRNLIDAEL DGTRPDSAHS
PILLPCCYDG LTARLVARAG FPATFLTGFG VSAVHGYPDT QLVSYQEMQT TATTVAEGLS
RAARELGTAA PIPCIADGDT GYGNALNVQR TVWGYARAGM AGIMLEDQVS PKRCGHVAGK
SVLGVAAAVA KVRAACDARD AYGAQYGAGS GPLILARTDA LATDGFEAAV ERCLAFREAG
ADMTFLEAPE SIEQMAEYCR RVDGPKLANM LEQGSTPILS PAELKQMGYT FAAYPLTLLS
SSIRAMQEAL LSIQQGKPTD DLICSFGETK DVVGFSQYAQ EEERYRVD
|
|---|
| |