| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_18335 |
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| Symbol | |
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| ID | 7197229 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 1159193 |
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| End bp | 1162459 |
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| Gene Length | 3267 bp |
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| Protein Length | 995 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177765 |
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| Protein GI | 219112027 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCG CGAACTTTTT GGATATTTTG AAGCCTCCAT TGGATGATCG AGAATATGTT
GCGTACACAT TAGAAAACGG ACTTCGCGTC TTGTTGTGCT CGGACGAGTC TTCGAACGAA
GCAGCCGTAG CTATGGATGT GCATGTCGGT GCATGCTCCG ACCCGGCGGA AGTTCCAGGA
ATGGCACATT TCAATGAGGT ATGAGTCGTA AAAGTAAATT GTCCTTTGCC ATAGTCTCCA
TGTTGAGTAA TTGCTCACAG TTGTCGGTTT TACATAGCAC ATGCTGTTTC TCGGGACGAA
GAAATATCCA AAGGAGGACT CCTTTGAAGC CTTTTTGGCT TCAAACGGTG GTTCTTCTAA
CGCTTACACG GCAAGCGAGG ATACGGTATA CTTCTTTGAT ATGGCAGCGG AAGCCAATGC
AAAATTCGCG GAAGGACTGT CTCGCTTCGG TGCTTTCTTT ACAGCTCCTT TGTTTACAGA
AGGTGCAACG GGTCGAGAAC TCAACGCTAT TGAAAGCGAG AACGCGAAGA ATCTGCAGTC
AGATACTTTT CGTATTTTCC AAATCGATAA ATCCCGAGCA AATCCAGACC ACCCTTACAG
CAAATTTTTT ACTGGTAACA AAAAAACTTT GTTAGACGAT ACCAAGGCAA AGGGCCTAAG
CCTTCGAGAG GAGCTCATCA AGTTTTACAA CAACTACTAT TCGGCCAACC AAATGACGTT
AGCTATTGTT GCTCCGCAGT CCATCGAAGA CCTGAAAAAC ATGGTTACGG AAGCATTTTT
GGATATTCCG AATCGAAATG TTGATACGCC TGAGTCCTCA TGGGCCGGCA TTCCTCCTTT
CATAGACGAG AGTTCGATCC CATCTTTCAA AAACGCGATC GAGATAGTTC CTGTGCAGGA
TCTTCGACAA ATTATGATTT CATGGCCAAT TGTGTATAGC TCAGAGGATC AAAGGCAGGA
TGACTTACTA AATAAGCCGA CAACGTACAT CGCACATTTA CTTGGGCACG AAGGACCCCG
CTCTTTGCTT TCCTACCTCA AAAGTAGGGG GTGGGCAAAC TCTGTTGGTT GTGCCAACAG
CGAGGAACTT TCTGACTTCG AGGTTTTTGA GGTGGTAGTA GGACTTACGA CCCAAGGCTT
GGCGCAAGTG GATGAGGTGG TAGAGTCAGT GTACGCCTAT ATCAACATGC TTCGTGACCG
CAAGATTCCG AACTATGTGT TTGAGGAAGT CTTTCGGCTT GAAGAACTGC AGTGGCGATT
TTTGACAAAG GGAAGCCCTC GGAGTTATGC TTCGTCCCTG TCTACTGCAA TGCAAAAGTA
TCCGCCAGAA CTGTACGTTG CTGGACCGAG GCGACTAGCG TTGGATGAAT TTATCATCGA
GAAAAGAATG AACGGGCTCG CTCGCTCCGA GTTTGTATCT AGGGAAGCGC TAGAGCGCTC
CCGGAAGCAA GCAGAGCTCT TAGCTGACAA TCTGACTGTA GATAATGCGC TTCTAACCGT
GATGAGCAAA GACTTTGACA ACAAAACGGA TCGCAAAGAA AAATGGTACG GGACGGACTA
CCGGGTCCGC CCTCTATCCG TTGAAACCCT CAGCCGATGG AGACGTGGTA TACGAGCGGA
GCAAATTAAG ATCGACTTTC CAAGACCCAA TCCGTTTATT CCTACCGAGC AAGGTTTGCG
CGTTAAAATT TCACCGTCCG GCTCAATGAA GGCTGCGAAG AGGTCTTTTG AATCCAGAAT
GATGCCCGTC CCCCCTCCGT CTCTGCTTCG AGATGATGGA CCGGACGGTC GATGGAAGGT
TTACTTTAAG GCTGATGATC GTTTCGGGTT GCCAAAAGGT TATATTGTCT TTCAGGTAGT
CACTGGTGAA GCGTTCGCTT CGCCTAGAAG TGCAGCCTTG TCGAATCTTT TTGAAGTCAG
TATTGCGGAC AAAATAGGGG AATACGCATA CGATGGTACG TAAAAGCAGA CACGAAATAT
GGTTACAAGC ACAGCGTTCT AGACTAATTG TGTGAGAAAA TCGTCTGTTG TATCAAGCCA
GCCTTGCCGG CTTAACGTAC GATGTAAAAA TTATGCCAAG AGGAATTCGA TTGACTTTTG
GGGGCTACAA CGACAAACTG AAACGCTTCG CTTCGTACAT TTCGTTGAAG CTGACGACCG
AAATACGTGA TGTTCTTCCG ACGAGTGAGA GTGTGTTTGA TCGATACAAG GATCAAGTAA
TGCGGGGATT GTCTGCATTT GATGTCAAGC AACCGTACTT TCATGCGTCT TATTATTCCC
AGATTGCTCT TCAGCCGCCT CGGTTTCAGT ACGACAATAC CGCACTAAGG GAAGCTATTA
GAGAAGTAAA TTTGAGTGAT TTGATTGAAT ACGTCAACAC TCTTTGGAAG TCGGGCCGCG
GCGAGGCTCT TATACAAGGA AATTTTGATC AAAAAGAAGC CATGGAACTC GTCAAAAACA
TTGGTGATGT CTTGCCGTTT CGACCGATTG TCCAGGAGGA ATACCCTTCA CGCCTGGAGG
CACTGCCTTT GCCTGCTTAC GGCCCAAAGA AGCTGCCAAC CAAGCTAATC GTTGCCGAGC
CAAACCCTGA CAACGAAAAC TCTGTTGCCA CAGTAATGCT ACAAAGTCTC GGCACGTCAG
AGAAGGATCA CGTACTGATC GAATTGATCA GCTCCATTGT GCAGGAGCCG TTTTACAACG
AACTCCGTAC AAAAAAGCAG CTCGGCTACA TTGTATCGTC AGGAATTCGT GCCGTGGGTA
ACAGCCGAAC GCTCTCATTC ATAGTCCAGT CCAGCGTGGC GCCGGCAGAC AAGTTGTCCA
TCGAAATTGT CAAGTTCTTG AATACAGTGG AAGATCGTTT TCTCAACAAG CTCCTTAAAG
CTGACCTCGC CGTGTACGTC AAAAGCCTGA TTGATCGCAA AACGGAACCC GACAAGGAAC
TCGCTACAGA AGTGACTCGC AATTGGGCGG AGATTGCGAG CGGACGATTT CAGTTTGATC
GCATCCAAAG GGAAGCTGCC GCGCTGCTCG ATGTACAAAA GGAGGATTTG CTAGATTTTT
GGAGACGAAT TTATACCGGG GACAATTGCC GTGTATTGGT GACACAGGTA GTTCCTCGCC
AAGGGCCAGC GTCTTCGCCC GTCCCAGCCA AGAGCACGGG ATACAATGAC AAGGATCCGC
TACCCGAAGG ACTAGTCCTC GGGATTGACG ACTTGGATCA ATTCCGCGCC GATAGGCAGA
TGTCAACTTA ATGCTAGGTC TACGACT
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| Protein sequence | MATANFLDIL KPPLDDREYV AYTLENGLRV LLCSDESSNE AAVAMDVHVG ACSDPAEVPG
MAHFNEHMLF LGTKKYPKED SFEAFLASNG GSSNAYTASE DTVYFFDMAA EANAKFAEGL
SRFGAFFTAP LFTEGATGRE LNAIESENAK NLQSDTFRIF QIDKSRANPD HPYSKFFTGN
KKTLLDDTKA KGLSLREELI KFYNNYYSAN QMTLAIVAPQ SIEDLKNMVT EAFLDIPNRN
VDTPESSWAG IPPFIDESSI PSFKNAIEIV PVQDLRQIMI SWPIVYSSED QRQDDLLNKP
TTYIAHLLGH EGPRSLLSYL KSRGWANSVG CANSEELSDF EVFEVVVGLT TQGLAQVDEV
VESVYAYINM LRDRKIPNYV FEEVFRLEEL QWRFLTKGSP RSYASSLSTA MQKYPPELYV
AGPRRLAEAL ERSRKQAELL ADNLTVDNAL LTVMSKDFDN KTDRKEKWYG TDYRVRPLSV
ETLSRWRRGI RAEQIKIDFP RPNPFIPTEQ GLRRSFESRM MPVPPPSLLR DDGPDGRWKV
YFKADDRFGL PKGYIVFQVV TGEAFASPRS AALSNLFEVS IADKIGEYAY DASLAGLTYD
VKIMPRGIRL TFGGYNDKLK RFASYISLKL TTEIRDVLPT SESVFDRYKD QVMRGLSAFD
VKQPYFHASY YSQIALQPPR FQYDNTALRE AIREVNLSDL IEYVNTLWKS GRGEALIQGN
FDQKEAMELV KNIGDVLPFR PIVQEEYPSR LEALPLPAYG PKKLPTKLIV AEPNPDNENS
VATVMLQSLG TSEKDHVLIE LISSIVQEPF YNELRTKKQL GYIVSSGIRA VGNSRTLSFI
VQSSVAPADK LSIEIVKFLN TVEDRFLNKL LKADLAVYVK SLIDRKTEPD KELATEVTRN
WAEIASGRFQ FDRIQREAAA LLDVQKEDLL DFWRRIYTGD NCRVLVTQVV PRQGPASSPV
PAKSTGYNDK DPLPEGLVLG IDDLDQFRAD RQMST
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