| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_18217 |
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| Symbol | |
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| ID | 7197066 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 830843 |
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| End bp | 832515 |
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| Gene Length | 1673 bp |
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| Protein Length | 326 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178014 |
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| Protein GI | 219112525 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00902772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAAAAAAGGC GCTGCGAACC CTCTCCGAAG GCACAATTAA GTGTTATGAT GTTGCCGTAT
GATAGCATCC AATAGAGACG TGGGATTGGC ATTGCCTAAG ACAGCCGTTG CTCGATTGAT
CGGACACGAT GGACCTGTTC AGACGCTGCG TTTTACCGGT AAGTTATTGT TTTCATGTTT
TCTTTTCTGC TTCCCAAAAG ATGAAAATAT TTCTCGCGCT TGGACTGAAC GACTGCATTC
AGTGGCCATT GATGACACCG ATAGAAATAT ATTCCTTCAC TTTGAGCTGA TGGGATAAAA
CATAGTACTA TATCGAGGCA TTTTCACGCG ATTTAATCTC AACCACTTGT TTTAATGTTT
TTAGGCGACG GAAAGTACTG TTTGACAGGT GGACACGATC GTTCCATTCG ACTATGGAAT
CCGACTCGTC TTGACCCAGC ATTTCCTCCC CTGCCATCGG GCACCTCAAA ACATCGGGAT
CAATCCATTG CCGTGGAAGC TCTTCCACGG GCTCTGCCAA TTCAGGCTTA CACGGACGGA
TATACCCACC CCATATCGTC TCTTGCGTTG GACCAGAAGT CCAGCACTTT AGTGGCAGCT
TCTGGAAATA CCCTAATAGT TACCGATGTC GTAACCAAAC GTGTGAAACG GCGATACCAA
GGCCACGCTG GGCGTATTAA CGCGGTTGCT ATCAGCGATA ACTGTGAGAC TTTCTTGTCG
GCCTCTTATG ATGCAACTGT TTGTGTTTGG GATGGACGTG CCAGTCGCAG TCATACTCCC
ATTCAAATTT TTAAGGAAGC CAAAGATTCT GTGTCATGCA TGCATCTAGA CCAGACAGAT
GGAAATGCCG TCATCATGGC GGGTTCAGTC GACGGCGCAG TGAGATCCTA CGACTTGAGA
AAAGGACAAA TCCGGTGCGA TCAAGTTGGG GGTGCGATCA CTTGTATGGC ACCTACTTAC
GACGACAAAT GTCTCGCAGT GAGCTGCCTT GATGGAACTA TCCGTTTGAT TGAGCTGGAT
ACGGGTGAGT TGCTCAACAC CTATTCTTCT CACCACAAGG CAGGCATGTA TGGACTGGAA
TGCTGCTTGA CTGCTGATGA CGCAACCATT GTCTCGGGGT CAGAGAATGG AGATGCTGTT
TTGTATGATT TAGTTCGTGC GACGCCCATA CAGATTCTTC GGGGGCATCG CAAGCCCACC
TGTACGATCG CTGCGCATCC TTCTGTTGCC CAAAATTCCG TCATACTTAC GGGAAGCTAC
GATGGAAACG CTGTAGTATG GGCGCACGAA TCTTCATTCA TGAGATGGGA AGAGTGATTG
TTTCTGTGTC ATGCGGGGAC TCAGGACCTA TTCTGTCAAA AATTTGGGTC TGGAGACAAT
CATACATATG ATGAGACAAG CCTCATCCAT GACCACAGTT CTCCCACCAT CGCTTCGAAT
TGGCATGCTG CTCCGCTTGC TGGTTGAATT AGCTGGTAAC ACGTCTCGCC TTTGTGCATC
AAACCTGATG GACAGGATGC CCCAGAGATT TTCTAGGAGA TTATAGTTCT TGCTTCTCCG
TCAAAAATTA ATGTGTATGC TTGCTATGTC AGTAAGCTAG ATGAACAAAG GCAGTGCCTT
CGTGGATTGA TGTAGAGTTA CGGTAAATTG AAAGAACACA AAATGAAGAC AAA
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| Protein sequence | MIASNRDVGL ALPKTAVARL IGHDGPVQTL RFTGDGKYCL TGGHDRSIRL WNPTPLPRAL
PIQAYTDGYT HPISSLALDQ KSSTLVAASG NTLIVTDVVT KRVKRRYQGH AGRINAVAIS
DNCETFLSAS YDATVCVWDG RASRSHTPIQ IFKEAKDSVS CMHLDQTDGN AVIMAGSVDG
AVRSYDLRKG QIRCDQVGGA ITCMAPTYDD KCLAVSCLDG TIRLIELDTG ELLNTYSSHH
KAGMYGLECC LTADDATIVS GSENGDAVLY DLVRATPIQI LRGHRKPTCT IAAHPSVAQN
SVILTGSYDG NAVVWAHESS FMRWEE
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