| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_18096 |
|---|
| Symbol | |
|---|
| ID | 7197419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 323012 |
|---|
| End bp | 324070 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177910 |
|---|
| Protein GI | 219112317 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCC ATTTTCTTCG CTCACAGCGT TGGCTCCGTT TGTTTCAGCT CTACAGCTTG
CTAGCTGTAA CACAGTCTGT TGATTACTAC CGACTGCTAG GCGTTTCACG GCGTGCATCA
CCACAGGAAA TCAAAAAAGC CTACCGTCAA AAATCGTTGG AACATCATCC CGATAAAAAC
AAAGATGAGA ATGCGGCTGG AGTATTCGCG GAAATTAACC GAGCGTATGA GGTTCTCGCG
GACGACGAAC TCAAGAACAT ATATGACCGC AGTGGGGCAC AAGGCGTTAC TGATTTTGAG
CAAAGAAACC GTAACAACAA TCACGGCGTT GATGAGGATT ACTTTTACAG TGAGCAGCCG
CGGCCTAAAA CGGAAACAGT CTCGTTTCCT CTCAGCGTCA CACTGGAACA GATGTACTCG
GGTGACTCAT TTGATATTCA ATATAATCGC CAAACGCTAT GCGTAGATTG GGAAATGTGC
ATCAAGCGGG ACAATTCATG CCATAGCAAC GGAATGCGGA TGCGGATTCA AAGATTTGGA
CCTAGCTTTC AACAGCAAAT TAAATCTCGA GACGACCGCT GTATAGCACC TGGAAAAAGA
TGGGTGGACC AATGCAGTCA CTGCTCGAGC ATGACTTCGA AAAAGGGCAA AATGCTTAAG
ATTGAGATTC CACCAGGCGC TCGGAAAGGG CAACGTCTTA CCTTTGCTGG CATGGCGGAC
GAGCGTGCCG AGCACGATAC CGGTGACTTG GTATTTATTC TAGAACAGCA ACCTCACGAA
GTCTTCCGAA GGGATCACGA TGATTTACAT TTGACTGTGC AAGTGCCATT AGTTGATGCA
TTGACCAACT TTTCAACGAC GCTGAATACG GTCGATGGCC AACCATTTAA TATTCACAAG
GATGGTGTGA TAGATACCGG AGATGTTCTG AAGGTGCCAG GAATGGGAAT GCCTAACCGA
AGTCGGCCAC GACAAAAGGG AGATTTACAT GTCAAATTCG ATGTGGTTTT TCCGGAGGAG
TTATCGCTCC GGCAAAAAGA AATGATACGT CAGGCATTC
|
|---|
| Protein sequence | MNGHFLRSQR WLRLFQLYSL LAVTQSVDYY RLLGVSRRAS PQEIKKAYRQ KSLEHHPDKN
KDENAAGVFA EINRAYEVLA DDELKNIYDR SGAQGVTDFE QRNRNNNHGV DEDYFYSEQP
RPKTETVSFP LSVTLEQMYS GDSFDIQYNR QTLCVDWEMC IKRDNSCHSN GMRMRIQRFG
PSFQQQIKSR DDRCIAPGKR WVDQCSHCSS MTSKKGKMLK IEIPPGARKG QRLTFAGMAD
ERAEHDTGDL VFILEQQPHE VFRRDHDDLH LTVQVPLVDA LTNFSTTLNT VDGQPFNIHK
DGVIDTGDVL KVPGMGMPNR SRPRQKGDLH VKFDVVFPEE LSLRQKEMIR QAF
|
|---|
| |