Gene PHATRDRAFT_10024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10024 
Symbol 
ID7197540 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp589171 
End bp590172 
Gene Length1002 bp 
Protein Length245 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177647 
Protein GI219111791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTTTCCCT GCGCGCGGCT CCGGAACCTC CCATATGATG CCGCTCTGGA AGACATCTTG 
ATTCTTTTTC AAGGGCTCGT GGTGATCGAT GTTGTTATTT CTTCCCAGGG GGATGCGTTC
GTTATTTTCG CCAACCCCAT GGATTTCCAG ATGGCATTGC AACGGTAAGG AAATGAAACG
AAATGGATTT GTAAAAGTCG TGTCAAAATT GCCAAAAAGA ATTGTCGGCT TAACGCGTCA
CTCTTTTGCA TGTTGCCAGA AGCGACCGCC AGACGATTGG TCGTCGGTTT GTTGAGATCG
TGGCAGCGAC TCGCTCGGAG TACTATGATG CCATTGCAAA GGTAAAAGCC GCATTTGTTG
TGAAACTATT GAAGACCGAG TGCTGGATAG CGTCTGGCAC TCATTTCTTT CTCTTTTTAG
CAACATTTAC AGGAGCAGGA AGGCCGAACT CATCTCTCCT CTAACGCGTC TCGGGTTTCA
GGAGAGGATA TTCTAGGGGA TGATCAGAAG TCTGCAGGGG AATCGGCGTC AGCCATGGCG
TCTTTATGGG GCGGATCGCA AGGAGGGATG AATTCACTCC CCCCGCAGGG TGGGTACGGA
GAAGGAATGC AGCATCATGG ACTACTTGGA ATGGGACCGC GATTGACGGG AATGAGTCGG
CAAGGCGGAA TTCATACCCC TCTGCAGAAG CGTACTGGAG GAGGTATTCA GGTTGGAGAA
CACACGGGCT TTCTACGCGT TAGAGGTCTT CCCTTTAGCG CCACCAGAGA CGACATATTT
AAGTTCTTTT TGGGATACAA TCCCACGCAG GAGAGCGTCG TTCTGACCTA CCGCAATGAT
GGAAGAGCTA CTGGAGAGGC GTACATTGGT TTTGCGACAG CGGACGACTC GAAACGCGCA
ATGGAATTGC ACCGTCGGGT GATGGGTTCC CGGTATGTTG AGTTGTTTAT CAGTAATAAG
GACGAACATG GTCGTGCTTT GGCTCGCTTT GGAGGCCGCT AA
 
Protein sequence
PFPCARLRNL PYDAALEDIL ILFQGLVVID VVISSQGDAF VIFANPMDFQ MALQRDRQTI 
GRRFVEIVAA TRSEYYDAIA KKSAGESASA MASLWGGSQG GMNSLPPQGG YGEGMQHHGL
LGMGPRLTGM SRQGGIHTPL QKRTGGGIQV GEHTGFLRVR GLPFSATRDD IFKFFLGYNP
TQESVVLTYR NDGRATGEAY IGFATADDSK RAMELHRRVM GSRYVELFIS NKDEHGRALA
RFGGR