Gene PHATRDRAFT_10005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10005 
Symbol 
ID7197559 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp700256 
End bp701104 
Gene Length849 bp 
Protein Length212 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177666 
Protein GI219111829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.105462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTCCGGTGG CCTTGGTCAC TTCTGGAGGT ACGGCTGCCG ACCTAGAAAA TCAGTCGGTT 
CGCTGCATAG ACAATTTTTC CACCGGATTA CGTGGTGCCA TTGCCGTTGA ACAGCTCCTT
CAAAGGGGCT ATGCGGTCGT GCATTTATCA CGGAAAGGAA GTGCAGAGCC CTTTGCTCGA
GCTTTGAGTC AATACTTGGG ACTTCAACAG GCAAATCATG GACTGGACGT ACAAAGTTTG
GGGCGACTTT TTGCTTCTGG CGACACAGAT GTTGAAGATG AGTTGGTGAA AGCGGTTCTA
GAACAGGAGC AAGATCCGTT TTTAACGAAT CCATCTTCTT CCGCAGCGGT CCGTCGATCA
AAAGCCTCTG AAAATGATGG CGTTCGTTTA AATCGTGCCT TACTGCATTC GAAAGCTGTT
CGTAATGCTG TTTTCGAACA AAGAGCAGCA ATGGTCGATG GCCGCTTATT GAGCATTTCT
TTCCGAACAG TTGAGGATTA CTTGGGGAGG CTTCAACTCT GCGCCGAGAG CTTGCGGGAC
GCGCAATCGC TCGTTATGAT TTTTTTGGCA GCTGCTGTTA GTGATTTTTA TGTTCCTGCG
GAAGGTCGCG TAGAGCACAA GATCCAAAGC GACGGCGAGG ATTTGGTGCT GACGCTCAAG
CCGGTACCCA AGGTTATTGA AGAGCTACGG CAAAAATGGT GCCCTGACGC CTTTGTGGTT
ACATTCAAGC TGGAGACGGA CACAAAAATA TTGAAAGAAA AGGCAGCGCG CGCGGTAGAA
CGCTACGGTT GTCACATGGT GATCGGCAAT CTATTAAAGT CTCGTCACAA CAAAGTGTGG
ATCTTATCT
 
Protein sequence
RPVALVTSGG TAADLENQSV RCIDNFSTGL RGAIAVEQLL QRGYAVVHLS RKGSAEPFAR 
ALSQYLGLQQ ANHGLDVQTM VDGRLLSISF RTVEDYLGRL QLCAESLRDA QSLVMIFLAA
AVSDFYVPAE GRVEHKIQSD GEDLVLTLKP VPKVIEELRQ KWCPDAFVVT FKLETDTKIL
KEKAARAVER YGCHMVIGNL LKSRHNKVWI LS