Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10005 |
Symbol | |
ID | 7197559 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 700256 |
End bp | 701104 |
Gene Length | 849 bp |
Protein Length | 212 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177666 |
Protein GI | 219111829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.105462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGTCCGGTGG CCTTGGTCAC TTCTGGAGGT ACGGCTGCCG ACCTAGAAAA TCAGTCGGTT CGCTGCATAG ACAATTTTTC CACCGGATTA CGTGGTGCCA TTGCCGTTGA ACAGCTCCTT CAAAGGGGCT ATGCGGTCGT GCATTTATCA CGGAAAGGAA GTGCAGAGCC CTTTGCTCGA GCTTTGAGTC AATACTTGGG ACTTCAACAG GCAAATCATG GACTGGACGT ACAAAGTTTG GGGCGACTTT TTGCTTCTGG CGACACAGAT GTTGAAGATG AGTTGGTGAA AGCGGTTCTA GAACAGGAGC AAGATCCGTT TTTAACGAAT CCATCTTCTT CCGCAGCGGT CCGTCGATCA AAAGCCTCTG AAAATGATGG CGTTCGTTTA AATCGTGCCT TACTGCATTC GAAAGCTGTT CGTAATGCTG TTTTCGAACA AAGAGCAGCA ATGGTCGATG GCCGCTTATT GAGCATTTCT TTCCGAACAG TTGAGGATTA CTTGGGGAGG CTTCAACTCT GCGCCGAGAG CTTGCGGGAC GCGCAATCGC TCGTTATGAT TTTTTTGGCA GCTGCTGTTA GTGATTTTTA TGTTCCTGCG GAAGGTCGCG TAGAGCACAA GATCCAAAGC GACGGCGAGG ATTTGGTGCT GACGCTCAAG CCGGTACCCA AGGTTATTGA AGAGCTACGG CAAAAATGGT GCCCTGACGC CTTTGTGGTT ACATTCAAGC TGGAGACGGA CACAAAAATA TTGAAAGAAA AGGCAGCGCG CGCGGTAGAA CGCTACGGTT GTCACATGGT GATCGGCAAT CTATTAAAGT CTCGTCACAA CAAAGTGTGG ATCTTATCT
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Protein sequence | RPVALVTSGG TAADLENQSV RCIDNFSTGL RGAIAVEQLL QRGYAVVHLS RKGSAEPFAR ALSQYLGLQQ ANHGLDVQTM VDGRLLSISF RTVEDYLGRL QLCAESLRDA QSLVMIFLAA AVSDFYVPAE GRVEHKIQSD GEDLVLTLKP VPKVIEELRQ KWCPDAFVVT FKLETDTKIL KEKAARAVER YGCHMVIGNL LKSRHNKVWI LS
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