Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9576 |
Symbol | |
ID | 7196728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2057152 |
End bp | 2057913 |
Gene Length | 762 bp |
Protein Length | 254 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177434 |
Protein GI | 219111365 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GAAATTCGAA ATGTGTGGGC GGAAAATGTA GAGGAAGAGA TGGCAATTAT ACGGGAAGTG ATCGAGAAAT ATCCTTACGT TGCAATGGAC ACTGAGTTTC CGGGTGTTGT TGCAAAGCCA ATCACGGAAA CGTTTTCGCC AGACTATCAT TACAAATCTC TGAAAGTAAA CGTGGATCTA CTGAAAATCA TTCAGCTCGG ACTATCGTTC GCCGATGCGA ACGGAAACTT TGCACCTGGA TGCCCTTGCT GGCAGTTTAA TTTCCAATTT AGCCTGGAAG ACGATATGTT TGCGCAAGAC TCGATTGATC TTTTGGTTAA GTCCGGAATT TCGTTTGAAG ATCATGCTAC GCGAGGTATC AATCCCAGAT TGTTTGGAGA ACTACTGATG GTTTCGGGCT TAGTGTTGGA CGATCGCGTC AAGTGGGTGT CTTTTCATTC TGGATATGAT TATGGATATC TCCTAAAGCT TCTGACAACA CAAGATTTAC CAGCAGACGA AAAAACATTC TTTGAGCTGC TCAAGATTTA CTTTCCTACA ATTTACGATA TCAAATACAT GACGAGTATT CTGGACGGCA ACTTTTTTGG CGGACTCCAA CGGCTGGCAG ATGATCTTAG TTGTCAACGA CTGGGTGCGG AACATCAAGC TGGAAGTGAT TGCATGCTTA CCATGGCAAC CTACTTTGCT CTGGCCAAAG CCAAATTTAC CAAATCTGAT GGGAGAATCG ACGAGAGTAA GTACACGAAT GAACTGTTCG GG
|
Protein sequence | EIRNVWAENV EEEMAIIREV IEKYPYVAMD TEFPGVVAKP ITETFSPDYH YKSLKVNVDL LKIIQLGLSF ADANGNFAPG CPCWQFNFQF SLEDDMFAQD SIDLLVKSGI SFEDHATRGI NPRLFGELLM VSGLVLDDRV KWVSFHSGYD YGYLLKLLTT QDLPADEKTF FELLKIYFPT IYDIKYMTSI LDGNFFGGLQ RLADDLSCQR LGAEHQAGSD CMLTMATYFA LAKAKFTKSD GRIDESKYTN ELFG
|
| |