Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9490 |
Symbol | |
ID | 7196112 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 865403 |
End bp | 866997 |
Gene Length | 1595 bp |
Protein Length | 506 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177179 |
Protein GI | 219110855 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.368235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACCAC CTCCACGATC CGGTGCAGCG AGTGTTGTAG TCAAAGGCCG TCTCTACGTC TTTGGGGGAT ACGGCGGAGG TACAGGCCGA CTGGATGACT TCTTCCAGTA CAGTTTCGAA ACTGGGCAAT GGGACGAAGT CAAAGTGCTT TCCGAAGCAA AACCAGGTCG TCGCGAGAAC AACGGTGTAG TAATTTCGGA TAGTAGCCGA TCCATTTATC TATTCGGCGG ATATAATGGA AGCTCTTGGT TAAATGACTT GTGGAAGTTT GACATCGAAA GTCAGCGATG GACGTGCATT CAAGAATCGT CAGATCCGGA CCGAGCGGAT GACGCAAACG CGGCTTCAGG GGATGTTCCT GCCGGGCATC AAGTAAGAGG CAAGGCTCCA AGTCGTCGAT TTGGTTACGT ATCGGTTGTT CATGAAGGGA AGTTTGTTTT GTTTGGGGGG TTTGACGGCT CACGCTGGTT AAACGACATG TTTGAGTTTG ATTTCTCCAC CAAAACTTGG TCGGAAATCG ATGCGAAAGG TTCGCTACCG AGTGTGCGTT CCTGTCCTGC ATGGGCCAAG GATGAGACAC ATGTTTACAT TCAGGGAGGA TATGACGGTG TTGAGCGTAA GGCTGACTTT TTCGCTTGCG ATTTGGCAAC CTACACGTGG ACCGAGCTAC CGTGCTATGG AACTCCTCCT TCTCCAAGAT ATTTTCATTC CTGCTGCCTG TACGGTAACA AAATGTACTG TTACGGGGGA TACTCCGGAA GTGAGCGGTT GGCGGACATG TTCGCATACG ATTTTGAGGT AAGCGGTTGA AATCGTGAAT TTCAGCATTC ATCGTTTTGA TGCTTACAGC ACTCTTTTCT TTATTCGATG AACAGACGAA TCATTGGGTC CAAGTCGATT GCTCCAGTGG AGATGCTCCC AGCGGGCGTT CGTCTCTGGT AGCACAGGTA TACGAAAATT GCCTCTACGT ATTTGGGGGC TACAATGGAG CTACGGTACT CAATGACTTC TACAAATTCC GGCTAAAACC CATTTTAATG CCTCCACCTA CGCTCGTTAA CGACTTTTCC AGAATGATAA ACAATCCTGA CCTTTCCGAC GTGCGATTTC TGGTCGAGGG TAAAGACGTT TTCGCTCATC GCTCTGTTCT GGCTTTTCGT TCGGAGTACT TTCGGGTTAT GTTGTGTGGT GGCATGAGGG AAAGTTTGGC TCGTCAAGAC GCTGGGACTT CTTGTGTGCC CAGTCACGAC CTTCAAGCAA TTGACCTTCC AAATGTATCA CACTTGGTCT TTTTGAAAGT TCTGGAATTT CTATACACAG ACTCAGTAAA GGACGTCTCA CTTGAGACCG GTATATATCT GCTCATTGCG AGTGAGCAGT TTATGCTCGA TCGGCTAAAG GCCCTCTGCG AAGATTTGAT TAGGAGAGAC ATTCAAGTTG AAAATGTTAT TGGTATATTG GCCGCCGCGC ACAGCCACCA TGCGGCAGGG CTCAAGGATA TCGCGTTAGA GTATATTATG CGAAATTTGA ATGATCCTGT GATTATGGCA GGTCTCGCTG ACTTGAAGTC AGAGCCAGAT TTGCTGCTGG AAATT
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Protein sequence | MVPPPRSGAA SVVVKGRLYV FGGYGGGTGR LDDFFQYSFE TGQWDEVKVL SEAKPGRREN NGVVISDSSR SIYLFGGYNG SSWLNDLWKF DIESQRWTCI QESSDPDRAD DANAASGDVP AGHQVRGKAP SRRFGYVSVV HEGKFVLFGG FDGSRWLNDM FEFDFSTKTW SEIDAKGSLP SVRSCPAWAK DETHVYIQGG YDGVERKADF FACDLATYTW TELPCYGTPP SPRYFHSCCL YGNKMYCYGG YSGSERLADM FAYDFETNHW VQVDCSSGDA PSGRSSLVAQ VYENCLYVFG GYNGATVLND FYKFRLKPIL MPPPTLVNDF SRMINNPDLS DVRFLVEGKD VFAHRSVLAF RSEYFRVMLC GGMRESLARQ DAGTSCVPSH DLQAIDLPNV SHLVFLKVLE FLYTDSVKDV SLETGIYLLI ASEQFMLDRL KALCEDLIRR DIQVENVIGI LAAAHSHHAA GLKDIALEYI MRNLNDPVIM AGLADLKSEP DLLLEI
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