Gene PHATRDRAFT_9478 details

Gene Information

• Locus tag: PHATRDRAFT_9478
• ID: 7196491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1270466
• End bp: 1271146
• Gene Length: 681 bp
• Protein Length: 227 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002177254
• Protein GI: 219111005

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACGAGGCAAA GCTTCTACCG CAGGCCTTTG CCAGATTCTT GCACTGCCTT CTCCTCTAAA 
AATGGACGCT TAATCTTCAG CTCAGCGTTG GCTTCGAAAG GCCTCAAATC TTTTTTCCCG 
CTAATGGAGC AATACTCGAC ACAATCGGAA CCCGCTTACT GCGGTATAAG CACCCTTGTC 
ATCGCTTTGA ATGCCTTCGC GATTGACCCC CGGCAGACAT GGAAGGGACC ATGGAGGTGG 
TATGAGGAAT CGATGCTCAA CTGCTGCTTG GATCTAGAAG AAGCAAAACA GAAAGGTGTG 
ACACTAAAGG CTTTTTCGTG CCTTGCCGTC TGCCAGGGTA TTCAAGCGTC AGTTTACTAT 
ACCGAGGAAG AAAGAGTGTC CGAGAACCAT TTTCGGGAGA CTATTAAAGC TGCTTGCGTT 
GAATCAGAAG GTGATGGAGA CGGTCTTCGG GACGTTGTTG TAGTATCGTA TACTCGCAAA 
ACACTTGGGC AAACTGGAAC TGGGCATTTT TCTCCTATCG CTGCATTCGA CAGCGTTTCC 
GACTCAGTTT TGATTTTGGA TACTGCTCGG TTCAAATACG GAGCGCATTG GGTTCCTTTG 
TCTTTATTAT ACGAAGCTAT GCAACCTGTG GACCCCGATA CTGGTCGCTC TAGAGGTTAC 
GTTTTGCTAT CAAACGAAAA A 

 

Protein sequence

TRQSFYRRPL PDSCTAFSSK NGRLIFSSAL ASKGLKSFFP LMEQYSTQSE PAYCGISTLV 
IALNAFAIDP RQTWKGPWRW YEESMLNCCL DLEEAKQKGV TLKAFSCLAV CQGIQASVYY 
TEEERVSENH FRETIKAACV ESEGDGDGLR DVVVVSYTRK TLGQTGTGHF SPIAAFDSVS 
DSVLILDTAR FKYGAHWVPL SLLYEAMQPV DPDTGRSRGY VLLSNEK