Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9476 |
Symbol | |
ID | 7196835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1851424 |
End bp | 1852449 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177386 |
Protein GI | 219111269 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TCCAGAAATA CGCTGTTGCG AGCACACCGT CAGATTATTC GTCTACGCAC GATGGACACT ATCCTCATGA ATGCACAACG TCAAGGTCGT ATTTCCTTTT ATATGACATG TACAGGGGAA GAAGCCATTC ATATAGGCGC AGCGTCGGCT TTGAACATAG GAGATCCTAT TCTAGCTCAG TACCGCGAAC AAGGTCTAAT CATGTGGCGT GGTTTTACCC TTGACCAGTT TACAGATCAG TGCTTTTCTA ACGAAGCCGA TATGGGCAAA GGGCGCCAAA TGCCAATTCA CTATGGCTCA AGAGCTTTAA ATTATCATAC AATTTCGAGT CCTTTGGGGA CACAACTTCC TCAGGCAGTC GGAGTGGCCT ATCGTCTCAA ACTTAATGGC AATCGAAATG TTTCGGTTGC TTTGTTTGGC GACGGTTGTG CATCGACCCC GGATTTTCAC TCTGCCTTAA ATTTCGCAGC TGTCCTCAAG TCACCGACTT TATTTATTTG CCGCAACAAC GGCTACGCCA TTTCAACATC GGTCGAGGAC CAGTACGCAG GTGACGGCAT AATTTGCCGA GCTCCAGGTT ACGGCATGGC AGGCATTCGT GTCGACGGGA ACGATATTTT CGCCGTACAC GCAGCGGTCC GAGAAGCCAA GCAATATGCG TTGGAACGCC ACGCACCCGT TTTAATCGAG TGTATGACCT ACCGGCAGGG ACACCATAGT ACGTCCGACG ACTCATCGCG ATATCGCAGC TCAGAAGAAG TTGAAGCATT TGCCGAAATC TGTGATCCGT TGACACGATT AGAGAACTTT TTGACCCAAC ATGAGTGGCT GAATGAAGAA AAGGCCAAGG AAATTCGAGA CGAAGAAAAG CAAGCCGTCA TTAAAGCCAT GAATCAAGCC GAAAGAAAGC CAAGACCAAA GTTGGACTAC ATGTTCACCG ACGTGTACCA CGACATGCCG CCACATCTTG TGGAGCAACA GACGCAGCTT CACGATCATC TCTCCAAATA TCCAAACGAA TATTGA
|
Protein sequence | SRNTLLRAHR QIIRLRTMDT ILMNAQRQGR ISFYMTCTGE EAIHIGAASA LNIGDPILAQ YREQGLIMWR GFTLDQFTDQ CFSNEADMGK GRQMPIHYGS RALNYHTISS PLGTQLPQAV GVAYRLKLNG NRNVSVALFG DGCASTPDFH SALNFAAVLK SPTLFICRNN GYAISTSVED QYAGDGIICR APGYGMAGIR VDGNDIFAVH AAVREAKQYA LERHAPVLIE CMTYRQGHHS TSDDSSRYRS SEEVEAFAEI CDPLTRLENF LTQHEWLNEE KAKEIRDEEK QAVIKAMNQA ERKPRPKLDY MFTDVYHDMP PHLVEQQTQL HDHLSKYPNE Y
|
| |