Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9475 |
Symbol | APC3 |
ID | 7196156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1116463 |
End bp | 1117473 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176724 |
Protein GI | 219109943 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCAGGCACA TCCTCGAACT ACTCTGTAGC ATGGGCAAAG CTTACCAGTG CCTTCGTAGC TATAACTGCA AGGAAGCGCT GCAAATTCTT CAAACGCTAC CCTTGCGACA GCAGGCAACG GCATGGGTGC TGCATCAGGA AGGACGTGCT TATTTGGAGC TCAATGAGTT TGCATCAGCC GAACGGTGCT TGGAGCAAAT GCAAATCGTA GACCCGGGCC GAATGAAAGG ATTGGAACTT CTGAGTACTG TGTATTGGCA AGTAAAGAAG GAGGTTGAAC TAGCCCACTT GGCGCAGCGT GTTACAGATT GGGATCGTGA ATCGCCCGAG GCCTGGTGTG TTGTTGGTAA CTGTTTTTCA TTGCAGAAAG ATCACGAAAC CGCATTGACG TTCTTCTCTC GTTCCTTGCA ACTTAACCCT AACTTCACCT ACACCCATAC TCTTTCTGGC TACGAATACA TGGCGAACGA AGATTTCGTG AAGGCAATAG CTTGCTTCCG TCAGGCTTTG CGGACCGACG ACAAACACTA CAATGCCTGG TATGGTCTAG GAGCCATTTA CCAACGCCAA GAAAAGTTTG ATCTGGCTGA GTATCATTTT GGAAAGGCTG TCGCGCTTCA TCCAACTAGC AGCGCTCTTC GATGCAACCT TGGCATTGCT CAATTTTCCA ATGGAAAAGC GTATCAAGCT CTCGATACCT TGTCAGAAGC CTTTCACCTG GACCCACGAA ATCCCCAGGC CCGCTTTCAA AGAGCTTCCA TCTATATGGC GCTGCATCGC CCGGAAGAAG CGCTTTCAGA ATTATGCAAG GTACGAGATG TTGCACCTCG CGAAGCAACT GTACATTTCT CGCTGGGGAA AGTATATAAG AAGTTGGGGC GGACGAAAGA GGCTATGAAA TGCTTTTTAA CAGCTATGGA TCTTGATCCT AAAGGGAGCC AAACCATCAA GTCTGCTTTG GAAAAGTTGG AGGAGCCTGA CATCGACGAG GGCACAGGCG TTGGGTTCTG A
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Protein sequence | VRHILELLCS MGKAYQCLRS YNCKEALQIL QTLPLRQQAT AWVLHQEGRA YLELNEFASA ERCLEQMQIV DPGRMKGLEL LSTVYWQVKK EVELAHLAQR VTDWDRESPE AWCVVGNCFS LQKDHETALT FFSRSLQLNP NFTYTHTLSG YEYMANEDFV KAIACFRQAL RTDDKHYNAW YGLGAIYQRQ EKFDLAEYHF GKAVALHPTS SALRCNLGIA QFSNGKAYQA LDTLSEAFHL DPRNPQARFQ RASIYMALHR PEEALSELCK VRDVAPREAT VHFSLGKVYK KLGRTKEAMK CFLTAMDLDP KGSQTIKSAL EKLEEPDIDE GTGVGF
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