Gene PHATRDRAFT_9475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_9475 
SymbolAPC3 
ID7196156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1116463 
End bp1117473 
Gene Length1011 bp 
Protein Length336 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176724 
Protein GI219109943 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCAGGCACA TCCTCGAACT ACTCTGTAGC ATGGGCAAAG CTTACCAGTG CCTTCGTAGC 
TATAACTGCA AGGAAGCGCT GCAAATTCTT CAAACGCTAC CCTTGCGACA GCAGGCAACG
GCATGGGTGC TGCATCAGGA AGGACGTGCT TATTTGGAGC TCAATGAGTT TGCATCAGCC
GAACGGTGCT TGGAGCAAAT GCAAATCGTA GACCCGGGCC GAATGAAAGG ATTGGAACTT
CTGAGTACTG TGTATTGGCA AGTAAAGAAG GAGGTTGAAC TAGCCCACTT GGCGCAGCGT
GTTACAGATT GGGATCGTGA ATCGCCCGAG GCCTGGTGTG TTGTTGGTAA CTGTTTTTCA
TTGCAGAAAG ATCACGAAAC CGCATTGACG TTCTTCTCTC GTTCCTTGCA ACTTAACCCT
AACTTCACCT ACACCCATAC TCTTTCTGGC TACGAATACA TGGCGAACGA AGATTTCGTG
AAGGCAATAG CTTGCTTCCG TCAGGCTTTG CGGACCGACG ACAAACACTA CAATGCCTGG
TATGGTCTAG GAGCCATTTA CCAACGCCAA GAAAAGTTTG ATCTGGCTGA GTATCATTTT
GGAAAGGCTG TCGCGCTTCA TCCAACTAGC AGCGCTCTTC GATGCAACCT TGGCATTGCT
CAATTTTCCA ATGGAAAAGC GTATCAAGCT CTCGATACCT TGTCAGAAGC CTTTCACCTG
GACCCACGAA ATCCCCAGGC CCGCTTTCAA AGAGCTTCCA TCTATATGGC GCTGCATCGC
CCGGAAGAAG CGCTTTCAGA ATTATGCAAG GTACGAGATG TTGCACCTCG CGAAGCAACT
GTACATTTCT CGCTGGGGAA AGTATATAAG AAGTTGGGGC GGACGAAAGA GGCTATGAAA
TGCTTTTTAA CAGCTATGGA TCTTGATCCT AAAGGGAGCC AAACCATCAA GTCTGCTTTG
GAAAAGTTGG AGGAGCCTGA CATCGACGAG GGCACAGGCG TTGGGTTCTG A
 
Protein sequence
VRHILELLCS MGKAYQCLRS YNCKEALQIL QTLPLRQQAT AWVLHQEGRA YLELNEFASA 
ERCLEQMQIV DPGRMKGLEL LSTVYWQVKK EVELAHLAQR VTDWDRESPE AWCVVGNCFS
LQKDHETALT FFSRSLQLNP NFTYTHTLSG YEYMANEDFV KAIACFRQAL RTDDKHYNAW
YGLGAIYQRQ EKFDLAEYHF GKAVALHPTS SALRCNLGIA QFSNGKAYQA LDTLSEAFHL
DPRNPQARFQ RASIYMALHR PEEALSELCK VRDVAPREAT VHFSLGKVYK KLGRTKEAMK
CFLTAMDLDP KGSQTIKSAL EKLEEPDIDE GTGVGF