Gene PHATRDRAFT_9342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_9342 
Symbol 
ID7196087 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp365365 
End bp366582 
Gene Length1218 bp 
Protein Length382 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176569 
Protein GI219109629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTG CATACGACTG GAACGAGGAC TCCAAGATCT CAGACGCCCC AACTTACAAG 
GTAGTCGGTT GGGAATTGAA TACTCGCGCA AAACCAGGAC CTCGCTGGGT GAATCTTCGT
CCCTTGCTTG ATTCTCGGCA TTTAGCCGTT CAAGCTGCCG ATCTCAATCT GAAGCTTATG
AAATGGCGGA TGCTACCAGA CCTGCAAGTT GAAAAGCTTC AAAAGACAAA AGTTCTCATT
ATTGGAGCGG GAACTCTTGG CTGTACGGTG GCGAGGGTTT TACTTGGCTG GGGTGTACGA
AACTTCACGT TCGTCGACTA CGGGAAGGTT AGTTATTCGA ACCCGGTGCG CCAATCTTTG
TTTACGCTCG ATGATTGCCA TGCAGATGGA GGAGGTGGAC GCCCAAAAGC AGAAGCTGCG
GCAGAGGCTT TGAAAGAAAT CGCAGCTGAT GTCCAGAGCA AAGGCGTTAC GCTTTCAATT
CCCATGCCAG GCCACATTGA AACTCGAGAA GCTATCGAGA CTTCTGTGAA TGCACTCGAT
CAGCTTATGC AACCTTGTGA TGTAGCTTTT CTATTGACGG ACACCCGAGA GTCGAGGTGG
CTGCCGACAC TTATGGCTGC AACCTACGGT AAAACCATGA TCAATGCAGC GCTTGGTTTA
GATAGCTGGT TGGTGATGCG GCACGGTGGT GGCCTCCTGG AACGACGTCG CTTTGGCTGT
TACTTTTGCA ATGATGTAGT TGCTCCTGAA AATTCAATGA AAAATCGAAC GGTGGACCAA
CAATGCACTG TCACTCGCCC TGGCTTAGCT CCTATTGCTA GCTCAATGGC AGTGGAGTTG
ATGGTATCAC TGCTGCATCA CGCTGATGGG TTGTCTGCAC CAGCCCCTGC TGTCGGAACG
TCCAATTTTA TGCCAACTGT CTCGCAGAAT GAATCAGGAA GCCCACTCGG TGTCATTCCG
CAACAAATAA GAGGCTCGCT AGTAACTTAC ACCATGATGA CGCCGACCGT GCCGGCTTTT
TGTCATTGCA CTGCATGCTC AGCTGGTGTC GTGGATTCCT ATCTGCACGA TAAGGTAGAA
CTCGTGTTTC AAACATGCCA GTCGTCAGGG GGTTCCTTTT TGGCAGGGAT ATCTGGCTTG
ACAGCTTTCA GGGCGGATGC TGCTGAAAAG TTTGACGAAT CGGGAGCATG GGATGACGAT
CACGAAGACG AGGTCTAA
 
Protein sequence
MKTAYDWNED SKISDAPTYK VVGWELNTRA KPGPRWVNLR PLLDSRHLAV QAADLNLKLM 
KWRMLPDLQV EKLQKTKVLI IGAGTLGCTV ARVLLGWGVR NFTFVDYGKV SYSNPVRQSL
FTLDDCHADG GGGRPKAEAA AEALKEIAAD VQSKGVTLSI PMPGHIETRE AIETSVNALD
QLMQPCDVAF LLTDTRESRW LPTLMAATYG KTMINAALGL DSWLVMRHGG GLLERRRFGC
YFCNDVVAPE NSMKNRTVDQ QCTVTRPGLA PIASSMAVEL MVSLLHHADG FPLGVIPQQI
RGSLVTYTMM TPTVPAFCHC TACSAGVVDS YLHDKVELVF QTCQSSGGSF LAGISGLTAF
RADAAEKFDE SGAWDDDHED EV