| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_9235 |
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| Symbol | |
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| ID | 7196235 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1843347 |
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| End bp | 1847100 |
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| Gene Length | 3754 bp |
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| Protein Length | 1147 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177384 |
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| Protein GI | 219111265 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAGCGTTTAC GAACATTGAC TGCCCCGCAC GTGGACAGTT TCGACTACTT CTGGGAGCAG
GGATTGGCCC GGGGGGTCCA AGATATCGAA CCGGCGGAAT TCAATATTGT CGATCCACAG
AAATTACGCG ACAATCCGGT CCAGATTGAT TGGAATGAAA CGAGTTCGGT CGAATTCTGG
GTCGAACACG CCCAGATTGC CAAACCGGCC AAAGCCCCCG GGGAACGGTC TCAGAAACTC
TTGCCACGTG AATGCCGGGA ACGGAAGCTC GTGTATGCCG GAGAGATCTC GGCAACCTTT
TGCTACCGCA TGATACAGCG TCGAAATGGC GTAGATTTCC CCTCCCGACC CGTCCGATTG
AACAAAACCT TTGGAGACAT GCCAATCATG GTCATGAGTA AAGGTTGTCA TTTGGAAGGA
ACCACTCCGA AACAGCTGGT GAAACTGAAA GAAGAGGTAG GTACACGCAA ATCGAAATGG
CGGGTTGCAA ACAATGCCGG CAAGTAGAGA TCTTACCCCA GACTATTTTT TTCTCACAAA
AAGGATAATG AGTTCGGTGG CTACTTTATC GTTGGTGGCA TCGAGCGTTG CGTCCGCTTG
CTTCAAGTCC CCCGCCGGAA TCATGCCACG GCTATTCAAC GCTCCAGCTA CAAAAACCGG
GGCAATACGT ATACAGATTT GGGCGTGGCC ATGCGATGCG CTCGTCATAA CGGGGACATG
AGCGCTATTA CCAACACGGT CCACTACTTG ACGACCGGTG GCGCCAACCT CAAGTTTGTT
GCTAAAAAGC AAGAGTTTCT CATTCCCGCT ATTCTCATTC TGCGTGCTCT GAGCGGATCC
GAGTCGCAAA CGGTAGCAGC CGACGTGGCA GCCGGTGGTA CCGGAATGGG CATTACCGAC
GAGGAATTGT ACGAGCGGAT CGTGCAAGGT GATCAATCGA ATACGTTCTT GGTCGCCCGG
GCCGGACTGC TATTACAAGA CGCAAGGGCG CGTTTTGGAT CTTTGAACAC TCCGGATGAG
TGCCTGGCAT TCATTGGCAC AAGATTCCGT CGACTCAGTC AAAAAGCCGA AACAACTAGC
GACGTTGAGA TTGGTCATCA CATTATTCGG CGCTTCGTCT TGATTCATCT ACCGACGTAT
AGAGACAAAC TAGAGTGTTT GTTGTTGATG CTTCGCAAAC TTTATGCTTT TGCGGCTGGA
GATTGTGGTG TGGACAACGC GGATTCTCTG CAGAACCAAG AAATTCTGCT TCCCGGTCAT
TTGATGTGTA CCTTCATAAA AGAAAAGTTT GAGGAATTTT TGTCAAGCTT GCGTCTCGCT
CTCTTGAGTG ATCTCCGGAA GGACTTCGCG CGAACTTCAG CAAAGCTAAC TGACGCCAAG
TACTGGGGGA AAATGGTGGA TCGACACGCT GGTAAGGCGT CCGGAGGGAT CGGGAAGAAA
GTGCAGCACT TCCTGTCGAC TGGAAACATC GTGTCGACTT CTGGTTTGGA TTTAATGCAA
GTTTCGGGCT ACACTATTGT AGCCGAAAGA TTGAATTTTT TACGATATTG TGCGCACTTT
CGCTCCGTGC ATCGTGGGCA GTTTTTTATG GAAATGAAGA CAACAGCGGT TCGGAAACTG
TTGCCAGATC AGTGGGGATT TCTGTGCCCA GTGCACACTC CTGATGGCGG GCCTTGCGGT
CTACTTAGTC ACTTGGCTCT GAAAAGCAAG GTTATGGCAT ATCCCTCCCG GCTGGATGCC
AAGGGTATGA TCGATCTCGA TGACCTTCTG CTGTCTCTAG GAGTAACGCC GTGTGGAGCA
GGTAGCCGAA ATGGAGACGG ACGAATTGGA TCGACTCACT TACATTTACC GGTGAGCATC
GATGGGCGCA TCGTAGGTGG AGCTAGTCCC TCTGTTCTCA AGATTATCGC TGCTCATTTG
AGAAAGCTGA AGGTCGACAA TCCTCCAGTT GTCCCACCAA CTCTTGAAGT TGGTCTTGTT
CCCCCGGGAA ATCCCGGTGC TCCGTATCCT GGGCTTTATC TATTCACGTG TGCGGCTCGA
CTTGTGCGTC CTGTTTTGAA CCGTGCTTCC GGTCACACGG AGTTCATAGG TCCATTGGAG
CAAGGTTATA TGGATATTGC TTGCCTTGAC GAAGATATTC GAGAAGGAAT CACTACACAC
CAAGAACTCG ACCCTACCAA TATGCTGAGT TTGATTGCCA ATCTGACGCC TTTTTCAGAT
CAAAACCAAT CGCCACGAAA CATGTATCAG TGTCAAATGG GGAAGCAAAC GATGGGAACT
CCCGCCCACT CTCTCCCATA CAGACCAGAC AACAAATTAT ATCGGCTTCA AACACCTCAA
GCTCCAGTGG TTCAGACTAG TATTCATGGA GAATATAAAA TGGATGAATA TCCGAACGGG
ACAAATGCGG TGGTTGGTGA GTTACTTGTC ACTTCTCTTT TACATCGGGT CTGCAAAAAT
AGTTTTTCCT CAAACCTTCC TAATTTGTGC AGCCGTTTTG AGTTATACTG GCTTTGATAT
GGAGGATAGC GTTATTCTGA ACAAGTCTTC GGTGGAACGA GGATTTGCAC ATGCTTCCGT
TTACAAAACG ATTGATGTAA GCCTCCAAGA GGAGGCCAAA ATGACAGGAG CGTCGTCATC
AGGAGAAGAT GTGCGCATGA AGTTTTCGAA TAAAGTGAAA TTCGATAAAG TCATGTATCC
AAGTTTACAA GACGACGGTT TACCACAGGT TGGCGATTGT ATGACTGAGG GTGATCCTCT
GTATTGTGTC GTCGATTCCA TCAGTGGAAT GGATAGAGCT GCAAAGCACA AAGAGCGTGA
AATAGCGTAC GTCCAGTCCG TTCGAGCTCT TGGCAATGAC AGTGGGAAAG GAGCTGACAA
CAAGGTGTCA ATTACGCTGC GCTTTCCACG AAATCCAGTT TTGGGAGACA AATTTTCGAG
TCGACATGGT CAAAAGGGAG TTTTGAGTAT TTTATGGCCT CAAGAGGACA TGCCTTTTAG
TGAATCTGGT ATCTCCCCTG ACGTGATTAT CAACCCTCAT GCATTCCCAA GCCGAATGAC
CATTGGAATG ATGGTGGAGA GCATGGCAGG AAAAAGTGGG GCTTTGCATG GAAACTTTCA
GAATGCTACT CCATTTTCGT TTCATGAATC AGGGGATAAA GTGTCAGTCG ATTATTTCGG
TGAACAACTA CAGGCCGCAG GGTATAATTA CTACGGAAGC GAGCCTCTGT ACAGTGGGGT
TTCCGGCTGT GTGATGCAAG CTGATCTCTA TATTGGTGTG GTATATTACC AGCGGCTTCG
TCACATGGTT TTAGACAAAT ATCAGGTCCG AGCCACCGGG CCAACAAACG AACTTACAAG
ACAGCCCATA AAAGGACGTA AGAAAGGTGG TGGTATCCGG CTTGGCGAAA TGGAGCGCGA
CAGCCTTCTT AGCCACGGAA CAGCCTTCCT GCTCCAAGAC CGATTGCTCA ATTGCAGCGA
CAAACATGTT GCATACGCGT GTTGCCGGTG CGGTGACTTG CTTATGTCGG CCACAGAGAG
GAGCACTGTT CAGACAACTG GGCAGAGCGC GAACGAAGCC ATCAATAAAC CGAAGATCCG
GCTTTATTGT CGAAGCGCCG GATGTGTTAA GGCGACCAAT CGCATGGATG GAAACGACGA
AGCTGTCGAG CCGATTGTAC TCCCGTACGT ATATCGATAT CTCGTCAACG AGCTCGCTGC
CATGAATGTA AAGATGCGAC TCGCAATCAA ATAG
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| Protein sequence | QRLRTLTAPH VDSFDYFWEQ GLARGVQDIE PAEFNIVDPQ KLRDNPIAKP AKAPGERSQK
LLPRECRERK LVYAGEISAT FCYRMIQRRN GVDFPSRPVR LNKTFGDMPI MVMSKGCHLE
GTTPKQLVKL KEEDNEFGGY FIVGGIERCV RLLQVPRRNH ATAIQRSSYK NRGNTYTDLG
VAMRCARHNG DMSAITNTVH YLTTGGANLK FVAKKQEFLI PAILILRALS GSESQTELYE
RIVQGDQSNT FLVARAGLLL QDARARFGSL NTPDECLAFI GTRFRRLSQK AETTSDVEIG
HHIIRRFVLI HLPTYRDKLE CLLLMLRKLY AFAAGDCGVD NADSLQNQEI LLPGHLMCTF
IKEKFEEFLS SLRLALLSDL RKDFARTSAK LTDAKYWGKM VDRHAGKASG GIGKKVQHFL
STGNIVSTSG LDLMQVSGYT IVAERLNFLR YCAHFRSVHR GQFFMEMKTT AVRKLLPDQW
GFLCPVHTPD GGPCGLLSHL ALKSKVMAYP SRLDAKGMID LDDLLLSLGV TPCGAGSRNG
DGRIGSTHLH LPVSIDGRIV GGASPSVLKI IAAHLRKLKV DNPPVVPPTL EVGLVPPGNP
GAPYPGLYLF TCAARLVRPV LNRASGHTEF IGPLEQGYMD IACLDEDIRE GITTHQELDP
TNMLSLIANL TPFSDQNQSP RNMYQCQMGK QTMGTPAHSL PYRPDNKLYR LQTPQAPVVQ
TSIHGEYKMD EYPNGTNAVV AVLSYTGFDM EDSVILNKSS VERGFAHASV YKTIDVSLQE
EAKMTGASSS GEDVRMKFSN KVKFDKVMYP SLQDDGLPQV GDCMTEGDPL YCVVDSISGM
DRAAKHKERE IAYVQSVRAL GNDSGKGADN KVSITLRFPR NPVLGDKFSS RHGQKGVLSI
LWPQEDMPFS ESGISPDVII NPHAFPSRMT IGMMVESMAG KSGALHGNFQ NATPFSFHES
GDKVSVDYFG EQLQAAGYNY YGSEPLYSGV SGCVMQADLY IGVVYYQRLR HMVLDKYQVR
ATGPTNELTR QPIKGRKKGG GIRLGEMERD SLLSHGTAFL LQDRLLNCSD KHVAYACCRC
GDLLMSATER STVQTTGQSA NEAINKPKIR LYCRSAGSVE PIVLPYVYRY LVNELAAMNV
KMRLAIK
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