| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_9005 |
|---|
| Symbol | |
|---|
| ID | 7196874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 2010152 |
|---|
| End bp | 2011234 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177425 |
|---|
| Protein GI | 219111347 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.299979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTGCACAAG ATAAACACGA ACGAGCTCTT ATCTCTCAGG TAGTCTCTCC TCAGGATATT
GGTGTCACAT ACGATATGAT CGGGGGTTTG AACGAAGTAA AGGAGCTGTT GCGGCAAAGT
ATAACGTACC CTCTAAAGTT TCCCCATCTT TACAGCGAAG GAATTGCTCG GGAGGCTGTG
AAGGGAGTGC TACTTTTTGG TCCGCCAGGT ACGCAAATAA CTCTTTCACA CTTGTTATCG
TGCCCGATGG TTCTAACCTT TCCCCCCCGT TAAATAGGAA CTGGAAAGAC TATGTTGGCA
AAGGCAGTTG CCACCGAAGG TGGTGCAAGT TTTCTCAGTG TGGATGCGTC TTCCGTAGAG
AACAAATGGC TAGGGGAGTC AGAAAAGAAC GCCAAGGCCG TTTTCACTCT CGCCCGTCGC
CTGGCACCTT GCGTAATCTT CGTTGACGAG GTCGATTCCT TGTTGTCGAG TCGAGAAGGT
ACATCAGACG ATTCAGCTCA CGGGACTTTG ACGAGCGTGA AGACAACCAT GATGAGCGAA
TGGGATGGTT TGAATTCAGG AACAAATGGA TCGGGTGAAG CAGGGTCCGA GCGAGTGGTA
GTAATCGGAT CAACGAATCG TCCATTCGAC CTGGACGAAG CAGTGCTGCG GCGCTTTCCG
CGGCGAATTT TGGTTGATTT GCCCGACCTT GAGACTCGCA CAGAGATTTT GGAAGTAACT
CTTGCCGAAA ACCGATTGGA CCCGGAGGTC AATTTGACAC AGATTGCTGA GCGCCTTGAA
GGCTACACGG GTTCGGATAT CAAAGAAGTT TGTCGGGAAG CCGTGGTTCA AATCAGTCAC
GAACAAGCTC GTCTCTTGGA CCAAGGCTTT ATGAATACTA GAGAGGACAT GACTCAAGGC
TCCTTGCAAA GGCTCCGCCC TGTCACAGCG GAGGATTTCG AGACTGCGTT AAACAAGCTG
AAGCGAAGTG TCTCGGAAAA GGGCCGAGAG CTCGCCCGTG TTTGGGAGTG GAATGATGAG
TATGGAGAGA TCAAGAAGGA GAAAAAGAAC CATCTTCCCC ATCTTGCAAA CATGTATTTA
TAA
|
|---|
| Protein sequence | LAQDKHERAL ISQVVSPQDI GVTYDMIGGL NEVKELLRQS ITYPLKFPHL YSEGIAREAV
KGVLLFGPPG TGKTMLAKAV ATEGGASFLS VDASSVENKW LGESEKNAKA VFTLARRLAP
CVIFVDEVDS LLSSREGTSD DSAHGTLTSV KTTMMSEWDG LNSGTNGSGE AGSERVVVIG
STNRPFDLDE AVLRRFPRRI LVDLPDLETR TEILEVTLAE NRLDPEVNLT QIAERLEGYT
GSDIKEVCRE AVVQISHEQA RLLDQGFMNT REDMTQGSLQ RLRPVTAEDF ETALNKLKRS
VSEKGRELAR VWEWNDEYGE IKKEKKNHLP HLANMYL
|
|---|
| |