Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_8987 |
Symbol | |
ID | 7196210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1676669 |
End bp | 1677631 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177346 |
Protein GI | 219111189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCTTTGACGC GCGAGCTACC CTCGTTCTCG TCCCACACGT ACACACTGTT TGGAATCAGT GGGGCTACTG GCTGTGCCCT GACCCATTCT GTGGTTATTC CTCTGGATGT GGTAAAGACC CGAGCGCAAA CGAATCCCGA CCAGTACAAA GGCGTTGTTG ATGCGGCCGT CAGTATTGCT AGCACGGAAG GTGTCGGAGG TCTGTTACTG GGTGCTCAAG CTACACTGGC TGGGTACTTT TGGTACGGGC TATCTGTGTA CCCATGTTAT ACCTTATTTA AACGCTCTTT GGCACAAACT GTGTTGTCGC CGGAAGTTGC GATGGCGCAC TCGACAGAAA TAGCGCTCGT CGCCGGTGCA TTGGCCTCAG TCGTGGCCAG CTTTGGTCTC ACTCCCTTAG AAGCTGCACG GATTCGGGCT GTGGCGGAAC CCGAAACCTA TCGCGAGTTA GGAGTGATAG GGACTCTGCG TAGAATCGCA AACGAGGATC CACAACAAGG TTGGAGAGCA ACGTACGCGG GGCTCCCTTC GCTACTGACG CGCCAAGTTA TTTTTGGATC CGTCAAGTTT TTGGCGTTTG AACGTGCATG TGAGGCAATC TTCACGGCGA TGCCTTCGCT CCGGGATGCA ACGTGGACGG CTCTAGGGGT AAGCCTCTTG GCAGGAGCTT TTTCGGGGGC TCTATCTTCA GTCGTTTCGC AGCCTGCTGA TTCTGTCCTG ACATACGTCG CTCGGAATAG CAGTGGGCGC CGATCCAGTC TTGGTGTTAT TGAAGGTTCA ATGGTCATGA TTGAAAAGGA AGGTGTCAGT GCTTTGTTTC GAGGACTTGG CAGTCGATCA ATTTGGGCGT CAAGCATTAT TGCAGGTCAA TTTCTACTTT ACGATGTATT TCGAACCTAC TTTGGCGTGA ATGCCGACGA TCTATCACAA GTATATGAAG TCATCCTGCC GAATATAAAC TAA
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Protein sequence | PLTRELPSFS SHTYTLFGIS GATGCALTHS VVIPLDVVKT RAQTNPDQYK GVVDAAVSIA STEGVGGLLL GAQATLAGYF WYGLSVYPCY TLFKRSLAQT VLSPEVAMAH STEIALVAGA LASVVASFGL TPLEAARIRA VAEPETYREL GVIGTLRRIA NEDPQQGWRA TYAGLPSLLT RQVIFGSVKF LAFERACEAI FTAMPSLRDA TWTALGVSLL AGAFSGALSS VVSQPADSVL TYVARNSSGR RSSLGVIEGS MVMIEKEGVS ALFRGLGSRS IWASSIIAGQ FLLYDVFRTY FGVNADDLSQ VYEVILPNIN
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