Gene PHATRDRAFT_8987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_8987 
Symbol 
ID7196210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1676669 
End bp1677631 
Gene Length963 bp 
Protein Length320 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177346 
Protein GI219111189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTTGACGC GCGAGCTACC CTCGTTCTCG TCCCACACGT ACACACTGTT TGGAATCAGT 
GGGGCTACTG GCTGTGCCCT GACCCATTCT GTGGTTATTC CTCTGGATGT GGTAAAGACC
CGAGCGCAAA CGAATCCCGA CCAGTACAAA GGCGTTGTTG ATGCGGCCGT CAGTATTGCT
AGCACGGAAG GTGTCGGAGG TCTGTTACTG GGTGCTCAAG CTACACTGGC TGGGTACTTT
TGGTACGGGC TATCTGTGTA CCCATGTTAT ACCTTATTTA AACGCTCTTT GGCACAAACT
GTGTTGTCGC CGGAAGTTGC GATGGCGCAC TCGACAGAAA TAGCGCTCGT CGCCGGTGCA
TTGGCCTCAG TCGTGGCCAG CTTTGGTCTC ACTCCCTTAG AAGCTGCACG GATTCGGGCT
GTGGCGGAAC CCGAAACCTA TCGCGAGTTA GGAGTGATAG GGACTCTGCG TAGAATCGCA
AACGAGGATC CACAACAAGG TTGGAGAGCA ACGTACGCGG GGCTCCCTTC GCTACTGACG
CGCCAAGTTA TTTTTGGATC CGTCAAGTTT TTGGCGTTTG AACGTGCATG TGAGGCAATC
TTCACGGCGA TGCCTTCGCT CCGGGATGCA ACGTGGACGG CTCTAGGGGT AAGCCTCTTG
GCAGGAGCTT TTTCGGGGGC TCTATCTTCA GTCGTTTCGC AGCCTGCTGA TTCTGTCCTG
ACATACGTCG CTCGGAATAG CAGTGGGCGC CGATCCAGTC TTGGTGTTAT TGAAGGTTCA
ATGGTCATGA TTGAAAAGGA AGGTGTCAGT GCTTTGTTTC GAGGACTTGG CAGTCGATCA
ATTTGGGCGT CAAGCATTAT TGCAGGTCAA TTTCTACTTT ACGATGTATT TCGAACCTAC
TTTGGCGTGA ATGCCGACGA TCTATCACAA GTATATGAAG TCATCCTGCC GAATATAAAC
TAA
 
Protein sequence
PLTRELPSFS SHTYTLFGIS GATGCALTHS VVIPLDVVKT RAQTNPDQYK GVVDAAVSIA 
STEGVGGLLL GAQATLAGYF WYGLSVYPCY TLFKRSLAQT VLSPEVAMAH STEIALVAGA
LASVVASFGL TPLEAARIRA VAEPETYREL GVIGTLRRIA NEDPQQGWRA TYAGLPSLLT
RQVIFGSVKF LAFERACEAI FTAMPSLRDA TWTALGVSLL AGAFSGALSS VVSQPADSVL
TYVARNSSGR RSSLGVIEGS MVMIEKEGVS ALFRGLGSRS IWASSIIAGQ FLLYDVFRTY
FGVNADDLSQ VYEVILPNIN