| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_8810 |
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| Symbol | |
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| ID | 7196223 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1754283 |
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| End bp | 1757066 |
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| Gene Length | 2784 bp |
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| Protein Length | 868 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | DNA topoisomerase |
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| Protein accession | XP_002177365 |
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| Protein GI | 219111227 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.917921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATCACTATCC TACACGTAGC GGAAAAACCT AGTATTGCTC AGGCCATTGC ACATGGATTG
GCATCAGCGG AAGGAAAATC ATCCAATCCT AGTATGCGAA GCAAGAGTCT CCCTGTGTAC
GAGCTGTCCA ACGGCATTTC CTTTCCCAAG GCTCCACACG CAAAACATTT CCAACATAAG
ATCACATCGG TGGCCGGGCA CGTATTTAAC GTGGATTTTC CCGAGAAATA TCAATCGTGG
GATTCAGTGG ATCCGGCCGA ACTCTTTGAG GCGCCAATTG TGCGAAAGCC TTGCAAATCC
TCCGTAGTTC GGCATTTGGA GGATGAAGCC CGTGGCGTGC ATTTCATTGT GCTTTGGATG
GACTGCGACC GGGAAGGTGA AAACATCAAC TTTGAAGTAC TCGACTGTTG TATGCATGTA
ATGAAGAGCG GTGGTAGCTC AAACTTTGAT CGCGTTTATC GTGCTTACTT TTCCGCAATT
AATCCGTCCG ATATTCAAAA AGCCTACAAC TCTTTGGTAG GTCATATCTC CCCTCAAGAC
ATTTTTGATT TTATTTCTGC ACAAAGCTCA ACATATTTTC TTCTTTTGCT TGGATAGGGC
AAGCCAGACA AGAACCAGGC CCTTTCCGTT GATGCCCGAC AGGAATTGGA TTTGAAAGTA
GGCATTGCTT TCTCGCGCTA CCAAACTCGA TACTTTCAAG GTCGCTATGG TGATCTCAAC
AGTGCAGTGC TTTCCTACGG CCCTTGCCAG ACCCCGACGC TCGGCTTTTG TGTGCAACGC
TACATTGACA TTCAAACGTT CAAACCGGAA CCGTACTGGG TGTTGGAACT GGCCGTCATG
AAGCGAGGGC GATCGTTGCG AGCTCTCTGG GGCTCGGGGC GTTCTTTCAA CAAGAACAAG
GTCGAAAAGT TGTTACTTGA GGCCTTGGAA AGTGGACCTT TTGCCAAAGT TACGAGCGTC
GTTGCCAAAG ATAAGAAACA GGGACGACCA ATTCCTTTGA ATACAGTGGC GCTTCTCAAA
GCTTGCAGTA AAGCACTAGG AATTGGTCCT CACGCCACGT TGCAAACTGC AGAACGACTT
TATCTGAGTG GCTATCTTTC GTACCCTAGA ACCGAGTCTT CGGCCTATCC GAAATCTTTC
GATATTTATG GCACTCTTCA GCAACAGTCA TCAGACGTTC GATGGGGGAG CTATGTGAGA
GAATTACTTC GAGAAGGTCC AAACAAGTCG CGGGGAGGCA TTGATATGGG AGACCATCCT
CCAATCACCC CATGCCGTGC TACTCGTGCT GGTGAACTAA GCGGGGACAT GGCGCGGGTT
TACGATTTAG TTGTGCGTCA TTTCATTGCT TCTGTCAGCC AAGATGCAGT GTGGCGTTCA
ACGCAGATCG ATTTTGCCAT CGAAGCTCTG GGAGAGAAAG GTGTATTTAC TCTTCGAGGC
AAAGAGCCTG TTTCACCGGG CTTCCTTGCC GTCCTGTTGC ATACAGAATA TGGCGAAGAG
AATATTGAAG GTGATGAAGA CGAGGAAGAG CGGGCCCTTC CAGCGTTTGC ATATGGTGAA
CTAATTCCTC TCACGAATAC CAGTTCGTCG CCAGGTGATT CATCTAAAGT TTCCGTTGTT
CCAGGTACCA CAGTTCGTGC TAACCTCGGC ATTAAAGAGA AGATGACAAC GCCACCCACT
TACCTTACCG AATCCGAGTT GATTTCGTTG ATGGAAAAGA ACGGAATTGG TACGGATGCC
AGTATTTCGA CACACATAGA AAATGTTCAA AAGCGCAATT ATGTCGCTTT AGAATCAGGC
CGTCGTTTGG TACCATCGAA GCTCGGTATT GTTTTGGCGC AAGGCTACCA TCAGATAGAC
AGCTCGCTTG TACTTCCTCG CGTTCGTTCT GACATAGAAG ACGAGTGCAA CAAGATTGCC
AAAGGGCTAT TGAGCAAGGA TATTGTTGTC CAAAAGGCTA TCGATTTGTT CAGAAACAAG
TTTGATTCGT TTGTGAATAA CATCTCCAAA ATGGATGTCT TGTTCAGCAC GTCATTTTCC
AAACTTGAAG ATGTTGGGAA ACCGTTTACC AGATGTGGCC TAACTCGTCG CTACTTGCAA
TTTATCGAAG GGCCACCACC TCGCTTGTAC AACAAATGGA CAGAAACCGT ATATCCTTTA
CCTTCAGGAG GTATTGTCAA ACAGTGGACA GGACGAGTCT GCTCGGTTGA AAACTGCAAT
TTTGAGCTGT GCCTTTTTTC AGTTGGTAAC CCACAGCGCA CTTTTCCTCT GTGTCCACGC
TGCTTCAACG ATTCCAAATG GTCTTTAGAT GCTGATGAGC TCCCTCAAGA TCCTACGGAC
ACGGAAGACG AACAGAAAGA AAAACAGATT ACTTCCATTG CTGGAAAACG CCTTGTTTTG
GAATGCCCAT TACCGGATGA ACACCCTTCG ATTGAGGAGT TGACTGTTAG TACAGATCCT
GAAAGCGATG GTGTTTTAAT TCTTGACCCC CACATGGGCC CGAAGTGGCG ACTCGTGTCT
ACTAGAGACC CGATCATCGT TTATATGCCC AAAGGTATCG AGAAGATCAC CGTTCTTAAC
AAAAAAGACG AAGCATTGGG AGTCCACCTT ATGCAGGTCG ACTTCAAAGC GGGCGATTCC
CCTTTTCCTG ACGGTGAATT AAAATACACT AGCTGTTTTC CCGAAGACGA GGTTTTGAAA
GCGAGAGTTA GAATTTATCA CGGCTCGGAC CGACTGACAG CATCAGGACG AGGTGGGCGA
GGCCGCGGCG GAAGGGGCGG GCGC
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| Protein sequence | ITILHVAEKP SIAQAIAHGL ASAEGKSSNP SMRSKSLPVY ELSNGISFPK APHAKHFQHK
ITSVAGHVFN VDFPEKYQSW DSVDPAELFE APIVRKPCKS SVVRHLEDEA RGVHFIVLWM
DCDREGENIN FEVLDCCMHV MKSGGSSNFD RVYRAYFSAI NPSDIQKAYN SLGKPDKNQA
LSVDARQELD LKVGIAFSRY QTRYFQGRYG DLNSAVLSYG PCQTPTLGFC VQRYIDIQTF
KPEPYWVLEL AVMKRGRSLR ALWGSGRSFN KNKVEKLLLE ALESGPFAKV TSVVAKDKKQ
GRPIPLNTVA LLKACSKALG IGPHATLQTA ERLYLSGYLS YPRTESSAYP KSFDIYGTLQ
QQSSDVRWGS YVRELLREGP NKSRGGIDMG DHPPITPCRA TRAGELSGDM ARVYDLVVRH
FIASVSQDAV WRSTQIDFAI EALGEKGVFT LRGKEPVSPG FLAVLLHTEY GEENIEVSVV
PGTTVRANLG IKEKMTTPPT YLTESELISL MEKNGIGTDA SISTHIENVQ KRNYVALESG
RRLVPSKLGI VLAQGYHQID SSLVLPRVRS DIEDECNKIA KGLLSKDIVV QKAIDLFRNK
FDSFVNNISK MDVLFSTSFS KLEDVGKPFT RCGLTRRYLQ FIEGPPPRLY NKWTETVYPL
PSGGIVKQWT GRVCSVENCN FELCLFSVGN PQRTFPLCPR CFNDSKWSLD ADELPQDPTD
TEDEQKEKQI TSIAGKRLVL ECPLPDEHPS IEELTVSTDP ESDGVLILDP HMGPKWRLVS
TRDPIIVYMP KGIEKITVLN KKDEALGVHL MQVDFKAGDS PFPDGELKYT SCFPEDEVLK
ARVRIYHGSD RLTASGRGGR GRGGRGGR
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