| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_83 |
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| Symbol | |
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| ID | 7196094 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 399327 |
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| End bp | 403119 |
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| Gene Length | 3793 bp |
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| Protein Length | 1164 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176578 |
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| Protein GI | 219109648 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.897392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGCGCCCCTG GAAGCGGAAA AAGTACACTC CTGAAGATGA TCGCTCAGAC ACTGCACAAA
AGCAAGGATC ATCGGCAAAC CGGAACTGTC TCGATCACTG GTGTTTCACC CGCAAGGAAT
ATTATATGGT CAAATCTTGT TGCCTATATT GATCAGATTG ATCGCCTGCA TCCGTATCTA
ACAGTTTTTG AAACTTGCGA ATTTGCTTGG CGTTGCCGCT CAGGCGGAAC TCATCGCCGC
ATCTTTCAAG GCGACGGACC AGATGTCGAT GATATGATTG CCAAACTCGA CGACGAGCTC
ACTGTCATCA ACAAAATACT GGAGGCTATG GGTCTAGCGC GCGTGAAAGA TACCTTCGTG
GGCGATCAAG AAAATGTTCG AGGCATCAGC GGTGGGGAAA AAAAGCGAGT TACCGTCGCT
GAAATGCTGT GCGTAGGATC TCCCATTATA TGCTGTGACG AAATAAGTAC TGGTCTGGAT
GGTAAGTGGA CGTCCACACT GCAGCAGTGG GTAAACTGTC ACGATATGGA TCTTACAGCT
CGATTTTTCT CTTAGCCGCA ACGACATATG ACATAACAAA ATGGATGGGA GCGGTGACCC
GTATCACGGA GACTATCAAA CTGGTGTCGC TGTTGCAACC TCCTCCAGAA ACGGTCGCCC
TGTTCGACGA AGTGATACTG TTGAGTAATG GCAAGGTGGT TTACAGTGGG CCTATCGACG
AGGTGATTGA CTATTTCTGC AATCTTGGGT ACGAGATTCC GGAAAGAATG GATGTGGCTG
ATTGGCTCCA GGCGCTTCCC ACGAAAGATG GTGTGAAGTT TATACGAAAA GTCGGCAGCG
AGATGATGAA GCATTTGTCA ACCGATGAGT TCGTTGAGAA GTTTTACTCT TCTCCGCGTG
GCAATAAAAT TCTGGAACGT TTGAATGCAC CATCGAGAGA CGGAGCCGAC ATGGTGAAGA
CATTGGGGGG CAAGAGGTTT GAAAATTCTT CCTTTGCTTC CTTGAGACTA TTGATCCGTA
GAGAGCTGAA GTTGTGGTGG CGTGACAAAT ATCAGATCAA AGCTACCTTG TTAAAGTGTA
TGTGTCGACC TTTGCCTTTG TTTCCAGAGC GGTGCTTGTC GTTTGCACCT AACCAACTTC
TGTCTCATTT TGCTCTTCAG CTCTCATTAT GGGAATTGTC GCTGGGACCT TGTTTTGGCA
ATCGGACAGT CCAAATTCGA TCGTCAGCAT CTTATTTCAG TCTATGTTCT ACAGCTGCGT
TGGGGCTATG ACTTCGATTG TGAAACAATT TGCAGAACGA CCTATTTTTT ACAAGCAGCA
AGATGCAAAT TTCTTCCCGA CATGGACGTA CGTTGTTGGC CGCAGCGTTG CGAGTGTACC
GACGTCGCTC ATTGATTCTG TCGGCTATGG AACAATCATC TTTTGGTTCG TTGGGCTAGC
CCACAACGAT GGCGCTACTG TTGGCAACTA CTTCATGTTC CTGCTGCTCT TGTTTGTTGT
ATCATTGACT GCGGTTTTCT TCTTTAGCGT ATTTTCGGCT TCAGTGAGTG TTGTGACAAT
AGCACAGCCG TGTCAGGCGA TAACAATGCT TGCTTTTATT CTCTTCAGTG GGTTTACGGT
TCAACCGGAT GTCATTCCAG TGTAAGTATT CGCGGAATAT CATTTTTTTT TGGTTGTTGG
AAGCGAAGAG AGGTCTGACA CTTGTCCTTT TAGATACTTT ATTTGGATTT ATTGGATAAA
CTTTTTTGCC TGGATCCTTC GAGGTCTGGC TGTCAACGAG TTTGATAGCG GGAAATACGA
TGACGAGGCG GAAACTAGTG AAGGTCTCAC TGAGGGGGAA CTCATCCTCA CCCGGTTTGG
CTTTACAATA AATGATGACC CTTTCTCAAG GGAATGGGTA TGGTGGGGGT TGCTGTTTGC
GGTCGGCTGT ACGTCGATAT CGTTGTTTGT CTCCACTTTC TTTCTAGACC GAATAAGATT
TGCTACGGGG GCATCCTTAG TTACAGATAA AGGAAGCGAT GAAATTGAAG ATCTGGGTCG
AGAGGAAGTG TACATCCCTT TTAAAAGAGC TAAACTGACT TTCCGAGACG TGCACTACAC
CGTCACTGCC TCAACGTCCG AAGAAAAGCT TGAGCTACTG AAAGGAGTCG ATGGTGTCGT
TGAAGCGGGA TTGATGACTG CGTTGATGGG GAGTTCAGGT GCGGGAAAGA CGACGTTGAT
GGATGTTCTG GCAATGAGAA AGAGTTCAGG AGAAATATCA GGAGACATCC GAGTGAATGG
ACATTCCCAA GAAAAGCTCT CATTTCGAAG AATGATGGGA TACGTCGAGC AATTCGATAC
ACAGACGCCA CAGCTGACAA TTCGAGAGAC GGTTTCATTC TCGGCAAAGT TACGTTTGGA
AGAGAAAGTT GCAGCAGTTG TGCCGGATAG TATGGAACAG TTTGTTGAGC AGACACTCCA
TACACTTGAG CTGACCAATA TCCAAGATCT TCAGGTGGGG TCAGACGAGA CTGGCGGGCT
GTCATTTGAG CAACGCAAAC GTCTTTCCAT TGCCATTGAA CTTGTGGCCA ATCCTTCAAT
TCTTTTCTTG GATGAACCAA CCAGCGGCTT GGTAAGCAAA ACGAGCAAGG TAGTACCAAG
ATTGTGCTGC GCATCAAGAC TCTAATCCCT TCTTTTAATC CAGGACGCTC GAGCGGCGGC
GATCGTGATG CGAGGCTTGA AGCGAATAGC TTTGAGCGGA CGAAGCGTTT GTGCTACAAT
TCATCAGCCT TCCATCGCTA TATTTAACGA GTTTGATCGT CTTCTTCTTC TGAAGCGTGG
AGGTGAGACA ATTTTCTTCG GAAATCTTGG AGAGAACAGC TGCAACCTTA TCAGCTACCT
CGAAGGATAC GAGGGGACGA CTTGTATTCA AGCTGGTGAG AATCCAGCTA CATGGATGTT
GACGACGATC GGCGCTGGTA GTGCCGCGAA CCCCCATAAA CCCTTCGACT ATGCAGGAAA
ATACCAAGAG TCCAATCTCC GTCGAAAGTG TCTGGATCAA ATCGATAGTA TTTGTGCATC
TTCGACGCCT GAAGGCAAAG TTTTGTTCGC TGGAAAATAC GCTGTATCCG TCAAAACACA
ATTTTATGCA GTGTTGCTCC GCACTATGAA GGTATATTTC CGATCCCCAA GCTATAACGT
GATCCGTGTC ATGGTATCCG GCACAGTAGC CCTTTTGTTC TCAAGCGTGT ACGCGTCCCA
ACGTGTCCCT GGAGATGAAG CGGACATGAA TTCACGTGTC AACTCCCTTT ACATTGCTGT
CCTTTTTCCT TGCGTGAATG CACTAAATTC TGTTTTACGC GTTTTTGAAG TGGAACGCAA
CATGTTCTAT CGTCACAAAG CCGCTAGCAT GTATGATTCT CGAGCCATCA CGCGAGCGTA
CACTATTGCT GAGGTTCCAT TCGTTTTCAT TGCTTCGCTT GTTTTCAGTA TTCTCTTTTA
CTTCCCAATG GGCTTCGCGC TGGAAGCAGA CAAGTTTTTC ATCTTCTTGC TAATCATATT
CTTGACGATC TCGACCTTTA CTTTTACGGG TCAAATGCTT ATCGGTCTTT TCCGTGATAG
TCAAACGGCT CAGGGATTTG GTGGACTCTT CATCACCTTT ACCTCTCTCT TCTCGGGAAT
CTTGCTTCGA CCGGACGCGA TCCCCAACTT TTGGATCTTT ATGTATTGGC TTATGCCCGG
GCACTATATT TACGAGGGGC TGATAATGTC CCAATTCAAT AATGACAATT CGCCAATTGT
GGCTTCCGTT GGA
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| Protein sequence | GAPGSGKSTL LKMIAQTLHK SKDHRQTGTV SITGVSPARN IIWSNLVAYI DQIDRLHPYL
TVFETCEFAW RCRSGGTHRR IFQGDGPDVD DMIAKLDDEL TVINKILEAM GLARVKDTFV
GDQENVRGIS GGEKKRVTVA EMLCVGSPII CCDEISTGLD AATTYDITKW MGAVTRITET
IKLVSLLQPP PETVALFDEV ILLSNGKVVY SGPIDEVIDY FCNLGYEIPE RMDVADWLQA
LPTKDGVKFI RKVGSEMMKH LSTDEFVEKF YSSPRGNKIL ERLNAPSRDG ADMVKTLGGK
RFENSSFASL RLLIRRELKL WWRDKYQIKA TLLKSLIMGI VAGTLFWQSD SPNSIVSILF
QSMFYSCVGA MTSIVKQFAE RPIFYKQQDA NFFPTWTYVV GRSVASVPTS LIDSVGYGTI
IFWFVGLAHN DGATVGNYFM FLLLLFVVSL TAVFFFSVFS ASVSVVTIAQ PCQAITMLAF
ILFSGFTVQP DVIPVYFIWI YWINFFAWIL RGLAVNEFDS GKYDDEAETS EGLTEGELIL
TRFGFTINDD PFSREWVWWG LLFAVGCTSI SLFVSTFFLD RIRFATGASL VTDKGSDEIE
DLGREEVYIP FKRAKLTFRD VHYTVTASTS EEKLELLKGV DGVVEAGLMT ALMGSSGAGK
TTLMDVLAMR KSSGEISGDI RVNGHSQEKL SFRRMMGYVE QFDTQTPQLT IRETVSFSAK
LRLEEKVAAV VPDSMEQFVE QTLHTLELTN IQDLQVGSDE TGGLSFEQRK RLSIAIELVA
NPSILFLDEP TSGLDARAAA IVMRGLKRIA LSGRSVCATI HQPSIAIFNE FDRLLLLKRG
GETIFFGNLG ENSCNLISYL EGYEGTTCIQ AGENPATWML TTIGAGSAAN PHKPFDYAGK
YQESNLRRKC LDQIDSICAS STPEGKVLFA GKYAVSVKTQ FYAVLLRTMK VYFRSPSYNV
IRVMVSGTVA LLFSSVYASQ RVPGDEADMN SRVNSLYIAV LFPCVNALNS VLRVFEVERN
MFYRHKAASM YDSRAITRAY TIAEVPFVFI ASLVFSILFY FPMGFALEAD KFFIFLLIIF
LTISTFTFTG QMLIGLFRDS QTAQGFGGLF ITFTSLFSGI LLRPDAIPNF WIFMYWLMPG
HYIYEGLIMS QFNNDNSPIV ASVG
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