Gene PHATRDRAFT_56605 details

Gene Information

• Locus tag: PHATRDRAFT_56605
• ID: 7196513
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1354029
• End bp: 1359762
• Gene Length: 5734 bp
• Protein Length: 1697 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002176769
• Protein GI: 219110034

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0809416
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCAGAGTTCT CAGCAGACGT TGGGTTGTTT GTATCTTTGT GACACCACGG TCTTTCAGAA 
ATTGGATCGT ATAAGGGATC AGAGAGTTTT CAAACTACTC CTTCTTTCTT TATTCTGTGA 
CTGCTTTAGT TGACTGTCTG CGATCGTTGT AGATTATTCA GAATTCGGTA CCTATATTGC 
GAGATATTCT CTGTAGATCC AATCGACTGC CTCCGTATCA ACGAAGGAAA GTTACACCAA 
TCACTGTTTA CAATCACTAA CTCGGTAATC ACTCTACTCT TCATTGACAC CATCAACAAT 
GAACATTCGA GGCATGGCTG TACTAGGAGC TGTCGCTCCA GTTCTGGCGT TCGTGCCCGA 
TTCCCTCAAA CGGCAGTCTC CCCGCGTCGC TTCGTTACAT ACACAAGTCA ACGCCCGCTC 
CATCCGACCA ACATTGACAC CTAATCCTAC CTCCTGGTCT ACACCATACT GCTCCAGTCC 
GTCTACCCGG CTCCAAATGG CCTGGGACGA TTCCAAGCCG TCCAATATGT TTGACGGTCC 
GCTCGCGCTC ACCAAAGAAC GTGACGCCTG CGGTGTGGGA TTCATCGCCA ACACGAAATC 
TGGTAAAGAG TTCGGTACCC ACAAGGTGCT ACAGCAGGGT ATTTCGGCAT TAACATGTAT 
GGAGCATCGC GGGGCCTGCG GTGGAGATGG TGTCTCTGGA GATGGTGCCG GCATCATGAC 
CCAGATTCCG TGGAAATTGT TGGATTCCTT CAGGTCGGAA AATTGTCCCC AACCCGGTGT 
TGGTATGACC TTTCTCCCCC AAGACGAAAC TCGCCGTGAA AAAGTCAAGA CCATGATTCA 
AGAGGTTTGT GAGAATAACG AGCTCGAGTT TTTGGGTTGG CGGGAGGTTC CGACGGATCC 
TTCCGTTTTG GGGGAACTCG CCCGTGCCGC CATGCCCAGT ATTTGGCAAT TTTTCGTCAA 
GGCCCCTGCA CGACTCTCCA ATGATGACGA GGAGCGGGAT GGTTTCGAGC GTACCCTCTA 
TCTTGTTCGT CGTCGGTTTG GCGTCGAGCT TGAGCGACTT GGACTCGACT CCGACGACGA 
AGACGTTTAT GTAGCCTCGT TCAGCTCGCG TACCATTGTT TACAAAGGCA TGGTCCAGTC 
GGCCGTGTTG CCCTTGTTTT ACAAGGATCT GGTCAATGAA GATTACACGA CCAAATTTGT 
CATTTTTCAT CGGCGGTTTT CCACCAACAC CAATCCCCGT TGGCAACTCG CGCAACCCAT 
GCGCGTAGTC GGACACAATG GAGAAATTAA CACGCTACTA GGCAACGTTA ATTGGGTGAA 
GGCGCGTGAA GCTGCTAAGA GCCTACCTAC CGACACGGAA GATTTGGTCG ATTACGATGC 
CACCATCAAC ATTGTTGGCA TGTGCAACAC ACAAGACCTT CCGACTGTAC TTGAACCTGT 
CGTAGATTTG GGCCGGTCTG ATTCGGCCAA TTTGGACTCC GTCTTTCAGC TCATGACCAT 
GTCTCGTCAC CGTGCCCCCT GTGCTCTAAT GGCGATGGTA CCAACAGCGT ACATGAACAA 
TCCTGATTTA GTCAACAATC CGGAAATTAC TGACTTTTAC AAGTTCCATG GTGGTCTGCT 
GGAAGCATGG GATGGTCCAG CTCTTCTGGT TTTTTCGGAT GGCAAGTCGA TTGGTGCGTC 
GTTGGATCGC AACGGATTGC GCCCAGCACG CTACTCTATC GGGAAGGACG GTACAGTGTA 
CATGATGAGT GAAACAGGCG TTGTTCCCGG TTTGAAAGAA TCGGACATTG TGGAAAAGGG 
ACGCCTCGGA CCTGGTCAAA TGATTAATGT TGATCTTTCT TCGGGAGAAT TTAAGGACAA 
TATCAAGATC AAGAGTGAGA TTGCTAGTCG TAAGTGCCCA ACTTTGCCGA AGATTTTCCC 
TCATGTCCCG ATGCTTGACC TATCTAACTA AATTCGTCTC CTTGTTACTT CAACGTGCGC 
AGGGCATCCT TACGGAGAAT GGATCAAGAA CCAACGTAAG GATGTTGTTA AAATTGATTC 
CTCTGAAGAA CGTTTATACG ACGATCAGAC AGCCACTTTT GCTCAAGCGA CGTTTGGTTG 
GAGCCTGGAA GACATTGGAA TGCAGATTGC CGACATGGCC GGTTCTGCCA AGGAAACTAC 
CTACTCAATG GGTGACGATG CTCCCCTGGC CTGCCTTTCG GAAAGGCCAC ACCCTCTCTA 
CAATTATTTT AAGCAACGAT TTGCCCAGGT TACCAACCCT CCAATCGATC CCCTGCGTGA 
AGGCATCGTA ATGTCTTTGG CGATGACTTT GGGGAAGAAG GAATCCATCT ACAAGGTGTC 
AGAGAACGGT GCCCGACTCA TTCATTTGGA GTCCCCGGTT TTGAACGGGG CCGAAATGGA 
TCGCATTGCC GAATTGTCAA AGAAAGAAAA CGGTGGTTTT AAGCAGCACA CTCTCTCCAC 
TCGTTACGAC TTGTCTGTCG GTCCTTCTGG ACTCAAGTCT AGTCTGGATG CTTTGTGTGA 
CAAAGCTGTC GAGGAGGTCC GTAGTGGAGC CGAGGTTCTC GTTCTGAGCG ATATGGCGAA 
GGATCAATCC ATTCTTGACG AGACCACATA CATTCCTCCG CTCGTTGCTG TTGGAGCAGT 
GCACCATCGT CTCATCGAAG CCGGTCTTCG TATGGACACT GGAATCATTG TCGAGACTGG 
ATCGGCCTGG TCTACTCATC ATTTTGCTTG CTTGGTCGGT TACGGAGCGA ATGCTGTCCA 
TCCCTATCTT GCTCTTGAGA CTGTCCGTCA GTGGCATCAG AGCGATCGAA CGCAAAAGAT 
GATGGAAAGC GGTAAGCTCA AAACAACAAC TCCCTCGAAG GCACAGGAAA ACTACCGTTC 
CGCTGTTGAG AATGGTCTTT TGAAGATTCT TTCCAAAATG GGCATTTCTC TCTTGACGTC 
CTACCAGGGC GCTCAGATTT TTGAGGCTCT TGGAATTGGA GAGGAAATAA TCAGTACCAG 
CTTCAAGGGA ACAACGAGCC GAATTGGAGG TGTCAACTTC AACGACGTTG CTTCCGAAAC 
CGTCATGATG AGACCAGAAG TGGCCGATAT GAAGATGAAG TTGGCGAACT ACGGTTTCTA 
CAAACCAGTT CCCAAGTTTG GAGAATATCA CATTAACTCA TCTGATTTGG CCAAATTGCT 
GCACGACGCT ATCGGTTTGG ACAAGAAAGT CAGCGATGCC ACCAACCGCT ACGAAGTTGA 
AAACAACGGT ATCAAGCCGA AGAGTGTCGC CAATTACGAG ATATTCAAAA AAAGTATTGA 
ATCCGCTCCT CTTGCCAACA TCCGCGACCT GCTTGACTTT GAATCGGACC GAGACAGTAT 
TTCCATCGAG GATGTTGAGC CTGCCTCAGA AATCATGACT CGTTTCTGTA CCGGCGCAAT 
GTCTCTTGGG GCTCTCAGTC GGGAAGCTCA TGAAACGCTT GCCATTGCTG TCAATCGCAT 
TGGGGGCAAA TCAAATTCAG GAGAGGGAGG AGAAGATGTT GTTCGCGGAC GGACCATAAG 
GGACGTTGAT GATAAAGGAC GAAGTCCCAC TTTCCCTCAT TTAGCAGGGC TTAAGAATGG 
CGACTCTGCC AACTCCTTCA TCCATCAAGT TGCCAGTGGG CGTTTCGGTG TTACTCCGGA 
ATTCTTGGTT ACCGCCAAAC AGCTGGAGAT TAAAATGGCT CAAGGTGCTA AGCCTGGTGA 
AGGTGGGCAG CTTCCTGGAA CCAAGGTTTC CGACTACATT GCAACTTTGC GTGCGAGTAA 
GCCTGGTGTC ACGCTGATAT CACCTCCTCC TCATCACGAC ATCTACAGTA TCGAGGTATG 
AAGTGCTGGG TCACAAATTG ACAGTGTTTT GCGAAAATAC TGTACTAACA CATATTGCTG 
ATGCCTTTTG TAGGATCTTG CCCAGCTTAT CCACGATCTT CATGCCGTCA ACGAGCGCGC 
CGGTGTTTCT GTCAAACTTG TTTCCTCCAT CGGTATCGGA ACTGTTGCCT GCGGTGTTGC 
CAAGGCTGAC GCTGACGTCA TCCAGATTTC TGGAAACGAC GGTGGTACAG GCGCTTCTCC 
ACTGTCTTCT ATTAAGCATG CTGGATGCCC ATGGGAGCTT GGCCTCTCTG AGGCTCACTC 
TGCTCTACTT AATAACAATT TGCGCGATCG CGTAACGCTT CGTGTCGATG GGGGTGTTCG 
CACTGGTCGA GATGTAACTA TTGCTGCCAT GATGGGAGCT GAGGAGTTTG GATTTGGAAC 
CATAGCTATG ATTGCAGAAG GCTGTGTTAT GGCTCGAGTA TGCCATCTTA ACACGTGTCC 
TGTCGGTGTT ACCAGCCAGA AGGAGGAACT ACGCAAAAAA TTTCCGGGCA CACCGGAGCA 
CGTGGTAAAT TTCTTTGAAT TTGTCGCTGA AGAAATTCGC GAGTTAATGG CCCATCTCGG 
ATACTCCAAG TTTGAGGATC TAATTGGTCG TGCCGATTTG TTGAAGGATT CAAATACCCA 
AATGGAACGC GTCGCCAAGA CCAAGGGCAT GGATTTGTCT CCGTTTTTCT CGGGCGTTCC 
GAATACGGCC GAAGACCGTT CATTCCTCCG TGCCACCATG TCCGGTGGTC AACAAATAAT 
GAAGGAAGAG ATTGTACACG TCAATGGATT CAGCTCTGAC TTAGACCGTG AGCTCTGCAA 
GAATGCAGAT GTCCAAAAGG TTATCGCGGA TAATGAAGGC GAAGCAGTAT TGAGCTTTGA 
TATTAAGAAT ACAGATCGTA GCACTTGCGC CATGCTGGCT GGAGACATTG CTCGTGCTCA 
CGGAAACAAC GGATTTGAAG GTCAGATTAA CGTCGAGTTC AAGGGGAGCG CCGGTCAATC 
ATTCGGTGCC TTTCTTCTTC CAGGGTTGTC TGTACGTCTC AGCGGAGAAG CGAATGACTA 
CGTTGGCAAG GGCATGCACG GTGGTGAACT GACTGTGGTT CCGTCCAGCG ATGCTGGATT 
CGTCTCCGCA GACTCGAGTA TCGTTGGAAA CGCTTGCCTC TACGGAGCAA CGGGTGGTGA 
TTTCCACGCC AATGGCCGCA CTGGTGAACG CTTTGGAGTG CGAAATAGCG GAGCTTTCGC 
CGTCGCAGAA GGCGCGGGTG ACCACTGCTG TGAATATATG ACCGGCGGTG TGGTGGTAAT 
GCTTGGTAGC GTGGGTCGTA ACGTCGGTGC CGGCATGACC GGGGGCCTGG GATACTTTTA 
CGACATTGAT GGTACCTTCG AAAGCAAAGT GAACGGTGAA ATTGTCAAGT ACCAAAGACT 
CGCCACTACT GAAGGCGAAA CTCAGTTGAA GCACATGATT GAGCGACACT ACCAGCTAAC 
GGGAAGTGAA CGTGCCGAAT CGATTTTGGA CAATTGGGAC GATGAGAAGG ACAAATTTTG 
GCAGGTGTAT CCACCTTCGG AGGCCGGTAC TGCTTTGGTC ACCGACACGG ACCTGATTTC 
CGAAACTTTG CGGGTGTCGG CTTCGGCTCC GGATGGGGCC ATGTGCTTTT TGCCAATTGG 
TGGTCAACTA ACTCCTGAAC AGGGTCAGCG ATGTGCCGAT TAGATCGTCT GCACGCTTGC 
CTTTCAGACA GTCATCCAGG AAACGTTGAT CCCATCTTCT TGTATAAGAC TCCAGCTTTT 
TTTTATCCAG GAGCTTACAA TTTGTGCATG TTTGTCGTCC CTGTATCATT ATTACCCACA 
ACGTAATGAA AGGACTAACT AGGTATTTTG CACT 

 

Protein sequence

MNIRGMAVLG AVAPVLAFVP DSLKRQSPRV ASLHTQVNAR SIRPTLTPNP TSWSTPYCSS 
PSTRLQMAWD DSKPSNMFDG PLALTKERDA CGVGFIANTK SGKEFGTHKV LQQGISALTC 
MEHRGACGGD GVSGDGAGIM TQIPWKLLDS FRSENCPQPG VGMTFLPQDE TRREKVKTMI 
QEVCENNELE FLGWREVPTD PSVLGELARA AMPSIWQFFV KAPARLSNDD EERDGFERTL 
YLVRRRFGVE LERLGLDSDD EDVYVASFSS RTIVYKGMVQ SAVLPLFYKD LVNEDYTTKF 
VIFHRRFSTN TNPRWQLAQP MRVVGHNGEI NTLLGNVNWV KAREAAKSLP TDTEDLVDYD 
ATINIVGMCN TQDLPTVLEP VVDLGRSDSA NLDSVFQLMT MSRHRAPCAL MAMVPTAYMN 
NPDLVNNPEI TDFYKFHGGL LEAWDGPALL VFSDGKSIGA SLDRNGLRPA RYSIGKDGTV 
YMMSETGVVP GLKESDIVEK GRLGPGQMIN VDLSSGEFKD NIKIKSEIAS RHPYGEWIKN 
QRKDVVKIDS SEERLYDDQT ATFAQATFGW SLEDIGMQIA DMAGSAKETT YSMGDDAPLA 
CLSERPHPLY NYFKQRFAQV TNPPIDPLRE GIVMSLAMTL GKKESIYKVS ENGARLIHLE 
SPVLNGAEMD RIAELSKKEN GGFKQHTLST RYDLSVGPSG LKSSLDALCD KAVEEVRSGA 
EVLVLSDMAK DQSILDETTY IPPLVAVGAV HHRLIEAGLR MDTGIIVETG SAWSTHHFAC 
LVGYGANAVH PYLALETVRQ WHQSDRTQKM MESGKLKTTT PSKAQENYRS AVENGLLKIL 
SKMGISLLTS YQGAQIFEAL GIGEEIISTS FKGTTSRIGG VNFNDVASET VMMRPEVADM 
KMKLANYGFY KPVPKFGEYH INSSDLAKLL HDAIGLDKKV SDATNRYEVE NNGIKPKSVA 
NYEIFKKSIE SAPLANIRDL LDFESDRDSI SIEDVEPASE IMTRFCTGAM SLGALSREAH 
ETLAIAVNRI GGKSNSGEGG EDVVRGRTIR DVDDKGRSPT FPHLAGLKNG DSANSFIHQV 
ASGRFGVTPE FLVTAKQLEI KMAQGAKPGE GGQLPGTKVS DYIATLRASK PGVTLISPPP 
HHDIYSIEDL AQLIHDLHAV NERAGVSVKL VSSIGIGTVA CGVAKADADV IQISGNDGGT 
GASPLSSIKH AGCPWELGLS EAHSALLNNN LRDRVTLRVD GGVRTGRDVT IAAMMGAEEF 
GFGTIAMIAE GCVMARVCHL NTCPVGVTSQ KEELRKKFPG TPEHVVNFFE FVAEEIRELM 
AHLGYSKFED LIGRADLLKD SNTQMERVAK TKGMDLSPFF SGVPNTAEDR SFLRATMSGG 
QQIMKEEIVH VNGFSSDLDR ELCKNADVQK VIADNEGEAV LSFDIKNTDR STCAMLAGDI 
ARAHGNNGFE GQINVEFKGS AGQSFGAFLL PGLSVRLSGE ANDYVGKGMH GGELTVVPSS 
DAGFVSADSS IVGNACLYGA TGGDFHANGR TGERFGVRNS GAFAVAEGAG DHCCEYMTGG 
VVVMLGSVGR NVGAGMTGGL GYFYDIDGTF ESKVNGEIVK YQRLATTEGE TQLKHMIERH 
YQLTGSERAE SILDNWDDEK DKFWQVYPPS EAGTALVTDT DLISETLRVS ASAPDGAMCF 
LPIGGQLTPE QGQRCAD