Gene PHATRDRAFT_5588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5588 
Symbol 
ID7196812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1744959 
End bp1745426 
Gene Length468 bp 
Protein Length156 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177363 
Protein GI219111223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0161736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTGTCAAAC CCAAAGTCTC GGTCTACATG GCCATTGACG GTGTCGCGCC CCGAGCCAAA 
CTCAACCAAC AGCGTTCCCG ACGCTTTCGC TCCGCCATGG ACATGGCTGA AGCTACCAAA
GATTTGAAGG ATGAGAAAGG CAACCAACGG GAAGTGTTCG ATTCCAACTG CATTACCCCC
GGTACCGAGT TCCTCGCCAA GGTCTCCAAC ACCATACAGT ACTTTATTCG CAAAAAAATC
AAGGAAGACC CCTCCTGGCA CGGACTGACG GTAATCTTTT CCGGACACGA CGTCCCCGGG
GAAGGCGAGC ACAAGATTAT GCAACATATA CGCGAAATGA GGGCACAGCC CAACTACGCA
CCCAACACGC GACACTGCAT TTACGGACAA GACGCCGATC TCATCATGCT GGGATTGGTC
ACACATGAAC CCCATTTTAC AATCCTACGT GAAGTTATCG ATTTCAAT
 
Protein sequence
IVKPKVSVYM AIDGVAPRAK LNQQRSRRFR SAMDMAEATK DLKDEKGNQR EVFDSNCITP 
GTEFLAKVSN TIQYFIRKKI KEDPSWHGLT VIFSGHDVPG EGEHKIMQHI REMRAQPNYA
PNTRHCIYGQ DADLIMLGLV THEPHFTILR EVIDFN