| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54068 |
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| Symbol | |
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| ID | 7196612 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 2524994 |
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| End bp | 2526574 |
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| Gene Length | 1581 bp |
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| Protein Length | 450 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | n-acetylglucosaminyl-phosphatidylinositol biosynthetic protein |
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| Protein accession | XP_002176995 |
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| Protein GI | 219110487 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.15052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAAAGAAAAA GGAGCATCTC GAGATGGCTA TAGCCATGAT GTGTATTGGC GTTATTACGG
CAAACATAGA CAGAGCACCA TCTATTTGTT CAGAAGAACT CACGTTAACT GATGGGTCAA
TAGGAAGAGG GAAGTATGAG GAAAAGCTAC CGAATCGCCA TGGTGTGTGA CTTTTTCTAC
CCTCGGCTCG GAGGGGTCGA GAATCATATC TGGAGTCTAT CACAAGAATT AGTAAAAATG
GGGCATAAGG TTATCGTAAT AACTCACGCC TACGGATCCC GAAGAGGTGT TCGATACATG
TCGGGACCTT TGAAGGTGTA CTATTGCCCA ATAACGCCGA TGGTTGATCA AGATGCCTTA
CCCTCGTTTA CCGCCACCTT TCCATTATTG CGGTCAATAT TGATTCGAGA AGGGATTGAG
ATTATTCATG CACATCAGGC GACAAGCACT ATGGCGAACG AAAGTATTGT GTATGCCGGT
ATTCTCGGCA TCGCCAGTGT TTACACGGAC CACTCGTTGT TTGGATTGAA CGACATTGCT
GGTATTGTAT TGAATCGCGT GCTACAGACG ACTATGTGTG CTGTAGACGC CGCCATCTGC
GTTTCTCATG CATGCCGGGA CAACTTTGTC CTGAGAGCGA ACGTGGGTGC GGAGCGCGTT
CGAGTCATTC CGAATGCTGT GGACGCATCT ATGTTTCAAC CCGACCCATC TCTTAAGTGC
CAACCTCGGT ATGTCAACCG GTGACCGTCC GTTGCCTCTT GCGCATTCTG ACTAAAAGTG
CGAATTCTCG CAGACTCACA AAGGTTCTTT TAAACCAGGC TCAATATTGT TGTTGTTTCT
CGTCTGGTGT ATCGGAAAGG GGTAGACCTT CTGGTTGGTA TTATACCAAA AATATGTCGA
AGACTTGACT CAGTTGATTT CATAATAGGT GGCGACGGCC CCAAAATGTT GGACTTGCAA
GAAATGGTGG AACTTGAACG TCTGCATGAT CGTGTTACAT TTTTAGGTTC TATCCCGCAC
GCACGGGTCC GAGACGTCTT GGTACAAGGA CATATTTTTT TGAATTGTTC TCTGACGGAG
TCCTTTTGCA TCGCTATCCT AGAAGCCGCT TCCACTGGCC TCCTTGTTGT TTCTACGAAC
GTCGGTGGAG TTCCCGAAGT TCTTCCAGAT GATATGATCC TTTTGGCCGA CTCAAACGTA
CCAAGTATTG TGCAGAGGTT GGTGGAAGCG GTTGATCGCT TTAACAATGG CAACGTTGCT
GACTCTTGGA GTGCCCACCA ACGAGTCACA GACATGTATT CATGGCAACG GGTTGCCGTC
GAAACTGAGC AAGTGTACAG TGACGTTTGC CGGCAGTCAA AACGATTGTT TTATGACCGA
ATTTCCCGAT TCTGCAGCAT AGGCGGAATT TCTGGGCCTG TTGTCGTGGT GCTGCTAGTT
ATCGTGGAAT TGTGGACTTG CGCCGCAAAT TGGTACGAGC CGTCTGCGAA TATTGACATT
GTGCCTGATG TAATCGAGAG CAAGACAAAG AAAAAAACGC GTTCGAAGAC GGAAGAACCA
CAAGTAAAGA TGCCATAGTA G
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| Protein sequence | MRKSYRIAMV CDFFYPRLGG VENHIWSLSQ ELVKMGHKVI VITHAYGSRR GVRYMSGPLK
VYYCPITPMV DQDALPSFTA TFPLLRSILI REGIEIIHAH QATSTMANES IVYAGILGIA
SVYTDHSLFG LNDIAGIVLN RVLQTTMCAV DAAICVSHAC RDNFVLRANV GAERVRVIPN
AVDASMFQPD PSLKCQPRLN IVVVSRLVYR KGVDLLVGII PKICRRLDSV DFIIGGDGPK
MLDLQEMVEL ERLHDRVTFL GSIPHARVRD VLVQGHIFLN CSLTESFCIA ILEAASTGLL
VVSTNVGGVP EVLPDDMILL ADSNVPSIVQ RLVEAVDRFN NGNVADSWSA HQRVTDMYSW
QRVAVETEQV YSDVCRQSKR LFYDRISRFC SIGGISGPVV VVLLVIVELW TCAANWYEPS
ANIDIVPDVI ESKTKKKTRS KTEEPQVKMP
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