Gene PHATRDRAFT_54067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54067 
Symbol 
ID7196982 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand- 
Start bp2504523 
End bp2505276 
Gene Length754 bp 
Protein Length130 aa 
Translation table 
GC content44% 
IMG OID 
Producthistone-like transcription factor 
Protein accessionXP_002177535 
Protein GI219111567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.237044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAG AAGGTGACGA AGGAAAACTT CCGCCGGGTG AAGAGTATGA AGAGATTCGA 
GAACAGGTGA GAAAAGTATT GAGGGAAAGT CGCCACCATT AGGGAGGGTA TGTGTAGCGC 
CTCTGAACTA ACATGTGTCC GATTGACTGG TAGGATCGGT ATTTGCCCAT CGCAAACATT 
GCGCGAATCA TGAAAAACAC TCTTCCAGAG AATGCCAAGA TTGCAAAAGA CTCGAAAGAA 
ACTGTGCAGG AATGCGTTTC GGAATTTATT TCATTTATTA CTTCAGAGGC AAGCGATAAG 
TGCCTTCAAG AGAAGAGGAA GACAATCAAT GGGGACGATC TTTTATGGGC AATGTCAACC 
TTAGGTTTTG ATAAGTATGT GGAACCCCTC AAGCTATATC TTAGCAAGTA TCGCGAAGCG 
GTAAAAGGCG AAAAACCTGA AAAACCCGGT CGGGTGACTG CCATGCAAGA AGACTCTTAG 
AGTCCGTGGA AGCTCTGGAA TCGCTGCTGG TCCTCATATT TTTGAAGCCT GCTGAAGTCT 
GACGTTGGAG TGCCCGCACC CATGACGACA CTTTGGTGAG TAGGCGGTAG ATGTCGAAAG 
CTGATGTCAG TTTAAATGCG CTTGAAAAGT TCAACATCGG CGGCATGAAA TCAAGGGAAG 
ATGGATACAT TGTCGTTAAA TAAAAACGTT GGTTTTTATC ATAGCTCTCC TTGAATAAAT 
TCTCAAATGC TTAAGATTTG CGATTTTGTG CGTC
 
Protein sequence
MSAEGDEGKL PPGEEYEEIR EQDRYLPIAN IARIMKNTLP ENAKIAKDSK ETVQECVSEF 
ISFITSEASD KCLQEKRKTI NGDDLLWAMS TLGFDKYVEP LKLYLSKYRE AVKGEKPEKP 
GRVTAMQEDS