Gene PHATRDRAFT_54064 details

Gene Information

• Locus tag: PHATRDRAFT_54064
• ID: 7196970
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2460938
• End bp: 2463351
• Gene Length: 2414 bp
• Protein Length: 447 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002176984
• Protein GI: 219110465

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.530235
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGCCT TGCTCAAACG GCTTTTGGAC GAAAAAGAAA CGGCTGTACA TATCCACACT 
CGTCCCACTG AAATACTCGT TGATATTCAC CTCTACAACC GTGTGCTCGA CGCTTGGGCC 
CGCGCCGCGC TCTTTGGCAC GCACGGGGTC GCGGCATCCC AACGCGCGCG CCAAATGCTC 
GTTCTCCTAC AGGAAAACTA CGAACAAACC AACGATCCGC TCCGACAACC CACCGTGACC 
AGCTTCAATC TCGTCCTTCA TGTTGTTACC AAAATTGAAG GCGCTCTCGT GGCCCGCCGA 
TTACTCGCTT GGATGGAACA TCTCTGCAAG TCGGGGAAAA ACCCACACGC GCAACCTTCC 
CGGACCGACT ATATTCTCGT CCTCGACGCT ATTGCCAATT CGCGGGACGA AAACGCTGGA 
GTTCTGGCCC AAGGATACTT GCGACACATG AAAGTCGCCA GTGCCGTGGC GCCGGATACG 
CTCTGCTACA ATATTGCCAT TAAGGCCTGG ACCAAATCCA GCAAACGCGG ACGAGCGTCT 
GCGGAACACG CCGATCGGAT TCTGGAAGAC ATGAAACAAT CGGCCACCCC GCCCGATCTC 
GTCACGTACG CTTCCGTTAT TGCGGCCTGG GCCTCTAGTG GCATGAAGAC ACACGCCGTC 
ACGCGTGCCG AAGAACTCTT GCGAGAATTG CAAATACAGG CGGACGAGGA CGAGCGCAAC 
GGCGGGCCGT TGGAGCAACC CAACACGGTA ATTTGGAACG CCGTCATGTC CACCTGGGTC 
AAATCTCGCA TGCCGGAAGC GGTCGATCGC ACGCGAGAAA TTCTCACGCA ACTACAAATG 
TCGACTACCA CACCGCCTGA TCTGATATCC TTCAACACTC ACCTACACGC TTTGTCCATG 
CACGCCGGTC GAAATCCGCG TCACGCCCAA GCCGCGATCG CCTTATTGGA GGAAATGGAA 
CACGGACACG ACGTCTTGCA GTGGGATTTT AAACCGAACC TGTTTAGTTA CAATCTTGTT 
ATTGAAGCCT TTTGTCGATC CAGTGATACG AACGCGGTTC AGCGAGCTGC CGATACGTTG 
CGGAAGTTGG TCAAACGAGA TGGTGTCGAT CCGGACACCT TTTCTTTCAA CCAAGTCTTG 
GCCGCACTTT CCAAAAGCGG TGCCGCCCAG ACGGCCGAGG AATTACTGAC GTACCAACGC 
AACGCTTACG TGAACGGTGT TCACCCGGCA GCCAAGCCCG ACATTATCAG CTTCACCTCC 
GTTATCGCAG CCCACGCTCG GAGTGGAGTC AAGGGCGCGT CGGAGAAGGC CGAAACGTTG 
CTGGAGCAAT GCCAGAAGGG CTACGCAGCG GGAGACACCA GTCTCAAGCC CAACCGTGTT 
TGCTACAATG CACTCATCAA TGGCTGGGCT AAATCAGGAG AAGGCACCTT GGGCGCACGC 
AAGGCCGAAG CACTGTTGAA CAATATGCAA GCGCAGTACG AAGCCGGCGA CGAGAGCATG 
AAACCAAACA TTGTCACATA CAATGGTGTC CTCAACGCGT GGGCTCGTTC GGGAACTCGC 
TGCTGTGGCG TCAAGGCTGA AGAATACCTG GATCGCATGT GGGAGTTGTA CAACGCTGGC 
GATACCAAAG TCAAGCCTGA CGATTTCAGT TATAATACTG TACGTATGGA ATTGCTCAGT 
TTGATGCTTG CCGTCGTATG GTCGTTAACA GCTTTTTCTC TCACTTTGGC GTTTGCTTCC 
GAATCCTTGC TACAGGTCAT CAACGCCATT TCCAAGAGCC AAAACGAGGG CAAAGCGCAA 
AAAGCGTTGC GAATTCTCCG ACGAATGGAC AAGCTATATC AGGCCGGCAA CAAGGAAGCA 
CGCCCGAATG CGGTAACTTA TACTGCAGTA TTGAACTCCT GCGCTTTTCC TGCAGTGCTT 
GATTTTCGAA CACGACGGAA AGCTCTGGAT ACAGCCATTT TCACTTTGGA GGAGTTGCAG 
TCGTCTGGAT ATGGACAGCC GAATCAGGTC ACGTATGGAA CTTTTATCAA GGCTTGCGCC 
AACCTACTTC ACGACGATGA CGATTTGCGC CGTGAGGTCA TTGAACGGGC CTTCCGACAA 
TGTTGCAAGG CTGGCCAGGT CGGTGAAATG GTACTAACGT ATCTGCGACA AGCAGCACCG 
GCTGACCTGT ATGAGGAGCT GTTGGCGGAT TCCATTTCAT CACATGCCAG AGTGTCGGTC 
CGTGACTTGC CCGAGGAATG GCGCTGTAAC GTTCAGGACG AAGACAATTG GCGTGTCAAG 
CCGTATGGAA ATAGAACACG CAATGGGAAA GCACGGGGTA GAAGAAAAGC TTCGCTACCC 
CGCTTGAACA AACACTGAGA AACGTATACC TATTCTGTCC AGTAGTGTAT ATATTAATTT 
CTTTAGCTCA ATGG 

 

Protein sequence

MEALLKRLLD EKETAVHIHT RPTEILVDIH LYNRVLDAWA RAALFGTHGV AASQRARQML 
VLLQENYEQT NDPLRQPTVT SFNLVLHVVT KIEGALVARR LLAWMEHLCK SGKNPHAQPS 
RTDYILVLDA IANSRDENAG VLAQGYLRHM KVASAVAPDT LCYNIAIKAW TKSSKRGRAS 
AEHADRILED MKQSATPPDL VTYASVIAAW ASSGMKTHAA EEYLDRMWEL YNAGDTKVKP 
DDFSYNTVIN AISKSQNEGK AQKALRILRR MDKLYQAGNK EARPNAVTYT AVLNSCAFPA 
VLDFRTRRKA LDTAIFTLEE LQSSGYGQPN QVTYGTFIKA CANLLHDDDD LRREVIERAF 
RQCCKAGQVG EMVLTYLRQA APADLYEELL ADSISSHARV SVRDLPEEWR CNVQDEDNWR 
VKPYGNRTRN GKARGRRKAS LPRLNKH